Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1228 |
Symbol | thiK |
ID | 5589021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1240691 |
End bp | 1241515 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640924927 |
Product | thiamine kinase |
Protein accession | YP_001462339 |
Protein GI | 157156457 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | [TIGR02721] thiamine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000138774 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGTTTC GCAGCAATAA TCCCATCATG CGCGACGAAT TGCTGTCGCG CTTTTTCCCG CAGTTTCATC CCGTCACGAC GTTTAATAGT GGGCTTAGTG GCGGGAGTTT TCTCATTGAA CATCAGGGCC AGCGTTTTGT TGTGCGTCAG CCGCACGATC CTGATGCGCC GCAGTCCGCG TTCTTGCGCC AGTATCGGGC TTTATCACAA CTACCCGCAA GCATTGCACC GAAGCCGCAT TTATATCTCC GTGACTGGAT GGTAGTCGAC TATCTGCCCG GCGCGGTAAA AACGTATTTG CCGGATACCA ACGAACTGGC AGGCTTGCTG TATTATCTAC ATCAACAACC ACGTTTTGGC TGGCGAATAA CGCTGTTGCC GTTACTGGAA CTGTACTGGC AGCAAAGCGA TCCGGCGCGG CGGACAGTGG GTTGGCTGCG AATGTTAAAA CGTCTGCGCA AAGCGCGGGA ACCACGGCCT TTACGCTTAA GTCCATTGCA TATGGATGTC CACGCCGGAA ATTTAGTGCA TAGCGCGTCA GGGTTAAAAC TCATCGACTG GGAGTATGCC GGAGATGGTG ATATCGCGCT GGAACTGGCG GCGGTGTGGG TGGAAAATAC TGAACAGCAC CGGCAATTGG TCAATGACTA TGCCACTCGC GCGAAGATTT ATCCGGCGCA ATTATGGCGT CAGGTCAGGC GATGGTTTCC CTGGCTGCTG ATGCTCAAAG CAGGGTGGTT TGAGTACCGC TGGCGACAAA CCGGCGATCA ACAATTTATC AGGCTGGCCG ATGACACCTG GCGGCAGCTA TTAATAAAAC AATAA
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Protein sequence | MPFRSNNPIM RDELLSRFFP QFHPVTTFNS GLSGGSFLIE HQGQRFVVRQ PHDPDAPQSA FLRQYRALSQ LPASIAPKPH LYLRDWMVVD YLPGAVKTYL PDTNELAGLL YYLHQQPRFG WRITLLPLLE LYWQQSDPAR RTVGWLRMLK RLRKAREPRP LRLSPLHMDV HAGNLVHSAS GLKLIDWEYA GDGDIALELA AVWVENTEQH RQLVNDYATR AKIYPAQLWR QVRRWFPWLL MLKAGWFEYR WRQTGDQQFI RLADDTWRQL LIKQ
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