Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1208 |
Symbol | rluC |
ID | 5589539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1222371 |
End bp | 1223330 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640924907 |
Product | 23S rRNA pseudouridylate synthase C |
Protein accession | YP_001462319 |
Protein GI | 157156049 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000011451 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG AGACTCCATC CGTAAAAATT GTTGCTATCA CCGCTGACGA AGCGGGGCAA CGTATCGATA ACTTTTTGCG TACCCAATTG AAAGGCGTAC CAAAAAGTAT GATTTACCGT ATTTTGCGTA AAGGCGAAGT GCGGGTGAAC AAAAAACGTA TTAAGCCTGA ATATAAACTC GAAGCGGGTG ATGAGGTGCG TATCCCACCG GTTCGCGTTG CTGAGCGGGA AGAAGAGGCG GTTTCGCCAC ATCTGCAAAA GGTGGCGGCG CTGGCGGACG TCATCTTATA TGAAGATGAT CATATCCTGG TGCTGAATAA ACCTTCCGGT ACGGCGGTAC ATGGCGGCAG TGGTTTAAGC TTCGGCGTTA TCGAAGGTTT GCGGGCGTTG CGCCCGGAAG CGCGGTTTCT TGAACTGGTT CATCGTCTCG ACCGGGACAC TTCAGGTGTG TTGCTGGTAG CGAAAAAACG CTCGGCGTTG CGTTCTCTGC ATGAGCAATT ACGTGAAAAA GGAATGCAAA AAGATTACCT GGCGCTGGTG CGCGGTCAGT GGCAGTCGCA TGTGAAGAGC GTTCAAGCGC CGTTATTGAA AAATATTCTG CAAAGCGGCG AACGTATCGT GCGTGTCAGT CAGGAAGGCA AACCGTCGGA AACACGCTTT AAAGTGGAAG AACGCTATGC ATTTGCCACC CTGGTGCGTT GTAGCCCGGT AACCGGACGT ACTCATCAGA TCCGTGTGCA TACACAGTAT GCGGGTCATC CGATTGCCTT TGACGATCGC TACGGTGACC GTGAATTTGA CAGACAGCTC ACTGAAGCAG GCACGGGATT AAATCGTCTG TTCCTGCACG CCGCAGCGTT GAAGTTTACC CATCCGGGGA CCGGTGAGGT GATGCGTATC GAAGCGCCGA TGGATGAAGG TTTGAAACGT TGTTTGCAAA AGCTGCGTAA CGCGCGCTAA
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Protein sequence | MKTETPSVKI VAITADEAGQ RIDNFLRTQL KGVPKSMIYR ILRKGEVRVN KKRIKPEYKL EAGDEVRIPP VRVAEREEEA VSPHLQKVAA LADVILYEDD HILVLNKPSG TAVHGGSGLS FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLREK GMQKDYLALV RGQWQSHVKS VQAPLLKNIL QSGERIVRVS QEGKPSETRF KVEERYAFAT LVRCSPVTGR THQIRVHTQY AGHPIAFDDR YGDREFDRQL TEAGTGLNRL FLHAAALKFT HPGTGEVMRI EAPMDEGLKR CLQKLRNAR
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