Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1144 |
Symbol | pgaA |
ID | 5588807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1167513 |
End bp | 1169936 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640924845 |
Product | outer membrane protein PgaA |
Protein accession | YP_001462258 |
Protein GI | 157158435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCAA GTAGCAGAAA AAGGTGCCCG AAAACCAAAT GGGCTTTGAA AATTCTTACT GCCGCATTTT TAGCAGCGAG TCCCGCGGCG AAGAGTGCCG TTAATAACGC CTATGATGCA TTGATTATTG AAGCTCGCAA GGGAAATACT CAGCCAGCTT TGTTATGGTT TGCACAAAAA TCAGCACTCA GTAATAACCA AATTGCTGAC TGGTTACAGA TTGCATTATG GGCCGGGCAA GATAAACAGG TTATTACCGT TTACAACCGC TACCGTTATC AGCAATTACC AGCGCGTGGT TATGCAGCTG TCGCCGTCGC TTATCGTAAC CTGCAACAAT GGCAAAACTC GCTTACACTG TGGCAAAAGG CGCTCTCTCT GGAGCCGCAA AATAAGGATT ATCAACGGGG ACAAATTTTA ACCCTGGCAG ATGCGGGTCA CTATGATACT GCGCTGGTTA AACTTAAGCA GCTTAACTCT GGAGCACCGG ACAAAGCCAA TTTACTCGCA GAAGTCTATA TCTATAAACT GGCGGGGCGT CATCAGGATG AATTACGGGC GATGACAGAG TCATTACCTG AAAATGCATC TACGCAACAA TATCCCACAG AATACGTGCA GGCATTACGT AATAATCAAC TTGCTGCCGC GATTGACGAT GCCAATTTAA CGCCAGATAT TCGCGCTGAT ATTCATGCCG AACTGGTCAG ACTGTCGTTT ATGCCTACGC GCAGTGAAAG TGAACGTTAT GCCATTGCCG ATCGCGCCCT CGCCCAATAC GCTGCATTAG AAATTCTGTG GCACGATAAC CCAGACCGTA CTGCCCAGTA CCAGCGTATT CAGGTTGATC ATCTTGGCGC GTTATTAACT CGCGATCGTT ATAAAGACGT TATTTCTCAC TATCAGCGAT TAAAAAAGAC GGGGCAAATT ATTCCGCCCT GGGGGCAATA TTGGGTTGCA TCGGCTTATC TCAAAGATCA TCAGCCGAAA AAAGCACAGT CAATAATGAC TGAGCTCTTT TATCACAAGG AGACCATTGC CCCGGATTTA TCCGATGAAG AACTTGCGGA TCTCTTTTAC AGCCACCTGG AGAGTGAAAA TTATCCGGGC GCGCTAACTG TCACCCAACA TACCATTAAT ACTTCGCCGC CTTTCCTTCG GTTAATGGGC ACGCCTACGA GCATCCCGAA TGATACCTGG TTACAGGGGC ATTCGTTTCT CTCAACCGTA GCAAAATATA GTAATGATCT TCCTCAGGCT GAAATGACAG CCAGAGAGCT TGCTTATAAC GCACCAGGAA ATCAGGGACT GCGCATTGAT TACGCGAGTG TGTTACAAGC CCGCGGTTGG CCTCGTGCAG CAGAAAATGA ATTAAAAAAA GCAGAAGTGA TCGAGCCACG TAATATTAAT CTGGAGGTTG AACAAACCTG GACAGCATTA ACGTTACAAG AATGGCAGCA GGCAGCTGTC TTAACGCACG ATGTTGTCGA ACGTGAACCG CAAGATCCCG GCGTTGTACG ATTAAAACGT GCGGTTGATG TACATAATCT TGCAGAGCTT CGTATCGCTG GCTCAACAGG AATTGATGCC GAAGGCCCGG ATAGTGGTAA ACATGATGTC GACTTAACCA CCATCGTTTA TTCACCACCG CTGAAGGATA ACTGGCGCGG TTTTGCTGGA TTCGGTTATG CCGATGGACA ATTTAGCGAA GGAAAAGGGA TTGTTCGCGA CTGGCTTGCG GGTGTTGAGT GGCGGTCACG TAATATCTGG CTCGAGGCAG AGTACGCTGA ACGCGTTTTC AATCATGAGC ATAAACCCGG CGCGCGCCTG TCTGGCTGGT ATGATTTTAA TGATAACTGG CGTATTGGTT CGCAACTGGA ACGCCTCTCT CACCGCGTTC CATTACGGGC AATGAAAAAT GGTGTTACAG GCAACAGTGC TCAGGCTTAT GTTCGCTGGT ATCAAAATGA GCGGCGTAAG TACGGTGTCT CCTGGGCTTT CACTGATTTT TCCGACAGTA ACCAGCGTCA TGAAGTCTCA CTTGAGGGTC AGGAACGCAT CTGGTCTTCA CCATATTTGA TTGTCGATTT CCTACCCAGT CTGTATTACG AACAAAATAC AGAACACGAT ACCCCATACT ACAACCCTAT AAAAACGTTC GATATTGTTC CGGCATTTGA GGCAAGCCAT TTGTTATGGC GAAGCTATGA AAATAGCTGG GAGCAAATAT TCAGCGCAGG TGTTGGTGCC TCCTGGCAAA AACATTATGG CACGGATGTC GTCACCCAAC TCGGCTACGG GCAACGCATT AGCTGGAATG ACGTGATTGA TGCTGGCGCA ACGCTACGCT GGGAAAAACG ACCTTATGAC GGTGACAGAG AACACAACTT ATACGTTGAA TTCGATATGA CATTCAGATT TTAA
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Protein sequence | MYSSSRKRCP KTKWALKILT AAFLAASPAA KSAVNNAYDA LIIEARKGNT QPALLWFAQK SALSNNQIAD WLQIALWAGQ DKQVITVYNR YRYQQLPARG YAAVAVAYRN LQQWQNSLTL WQKALSLEPQ NKDYQRGQIL TLADAGHYDT ALVKLKQLNS GAPDKANLLA EVYIYKLAGR HQDELRAMTE SLPENASTQQ YPTEYVQALR NNQLAAAIDD ANLTPDIRAD IHAELVRLSF MPTRSESERY AIADRALAQY AALEILWHDN PDRTAQYQRI QVDHLGALLT RDRYKDVISH YQRLKKTGQI IPPWGQYWVA SAYLKDHQPK KAQSIMTELF YHKETIAPDL SDEELADLFY SHLESENYPG ALTVTQHTIN TSPPFLRLMG TPTSIPNDTW LQGHSFLSTV AKYSNDLPQA EMTARELAYN APGNQGLRID YASVLQARGW PRAAENELKK AEVIEPRNIN LEVEQTWTAL TLQEWQQAAV LTHDVVEREP QDPGVVRLKR AVDVHNLAEL RIAGSTGIDA EGPDSGKHDV DLTTIVYSPP LKDNWRGFAG FGYADGQFSE GKGIVRDWLA GVEWRSRNIW LEAEYAERVF NHEHKPGARL SGWYDFNDNW RIGSQLERLS HRVPLRAMKN GVTGNSAQAY VRWYQNERRK YGVSWAFTDF SDSNQRHEVS LEGQERIWSS PYLIVDFLPS LYYEQNTEHD TPYYNPIKTF DIVPAFEASH LLWRSYENSW EQIFSAGVGA SWQKHYGTDV VTQLGYGQRI SWNDVIDAGA TLRWEKRPYD GDREHNLYVE FDMTFRF
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