Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1132 |
Symbol | putA |
ID | 5585999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1152569 |
End bp | 1156531 |
Gene Length | 3963 bp |
Protein Length | 1320 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640924835 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001462248 |
Protein GI | 157158674 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.585583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAACCA CCACCATGGG GGTTAAGCTG GACGACGCGA CGCGTGAGCG TATTAAGTCT GCCGCGACAC GTATCGATCG CACACCACAC TGGTTAATTA AGCAGGCGAT TTTTTCTTAT CTCGAACAAC TGGAAAACAG CGATACTCTG CCAGAGCTAC CTGCGCTGCT TTCTGGCGCT GCCAATGAGA GCGATGAAGC ACCGACTCCG GCAGAGGAAC CACACCAGCC ATTCCTCGAC TTTGCCGAGC AAATTTTGCC CCAGTCGGTT TCCCGCGCCG CGATCACCGC GGCCTATCGT CGCCCGGAAA CCGAAGCGGT TTCTATGCTG CTGGAACAAG CCCGCCTGCC GCAGCCAGTT GCTGAACAGG CGCACAAACT GGCGTATCAA CTGGCCGATA AACTGCGTAA TCAAAAAAAT GCCAGTGGTC GCGCAGGTAT GGTCCAGGGG TTATTGCAGG AGTTTTCGCT GTCATCGCAG GAAGGCGTGG CGCTGATGTG TCTGGCAGAA GCGTTGTTGC GTATTCCCGA CAAAGCCACC CGCGACGCGT TAATTCGCGA CAAAATCAGC AACGGTAACT GGCAGTCACA CATTGGTCGT AGCCCGTCAC TGTTTGTGAA TGCCGCCACC TGGGGGCTGC TGTTTACTGG CAAACTGGTT TCCACCCATA ACGAAGCCAT CCTCTCCCGC TCGCTGAACC GCATTATCGG TAAAAGCGGT GAACCGCTGA TCCGCAAAGG TGTGGATATG GCGATGCGCC TGATGGGCGA GCAGTTCGTC ACGGGTGAAA CCATCGCGGA AGCGTTAGCC AATGCCCGCA AGCTGGAAGA GAAAGGTTTC CGTTACTCTT ACGATATGCT GGGCGAAGCT GCACTGACTG CCGCAGACGC ACAGGCGTAT ATGGTTTCCT ATCAGCAGGC GATTCACGCC ATCGGTAAAG CGTCTAACGG TCGTGGCATC TATGAAGGGC CGGGCATTTC AATCAAACTG TCGGCGCTGC ATCCGCGTTA TAGCCGCGCC CAGTATGACC GGGTAATGGA AGAACTTTAC CCGCGTCTGA AATCACTCAC CCTGCTGGCG CGTCAGTATG ATATTGGTAT TAACATCGAT GCCGAAGAGG CCGATCGTCT GGAGATCTCC CTCGATCTGC TGGAAAAACT CTGTTTCGAG CCGGAACTGG CAGGCTGGAA CGGCATCGGT TTTGTTATTC AGGCTTATCA AAAACGCTGC CCGTTGGTGA TTGATTACCT GATTGATCTC GCCACCCGTA GCCGTCGCCG TCTGATGATT CGTCTGGTGA AAGGCGCGTA CTGGGATAGT GAAATTAAGC GTGCGCAGAT GGACGGCCTT GAAGGTTATC CGGTTTATAC CCGCAAGGTG TATACCGACG TTTCTTATCT CGCCTGTGCG AAAAAACTGC TGGCGGTGCC GAATCTAATC TACCCGCAGT TCGCGACGCA CAACGCCCAT ACGCTGGCAG CGATTTATCA ACTGGCAGGT CAGAACTACT ATCCGGGTCA GTACGAGTTC CAGTGCCTGC ATGGTATGGG CGAGCCACTG TACGAGCAGG TCACCGGGAA AGTTGCCGAC GGTAAACTTA ACCGACCGTG TCGTATTTAT GCCCCGGTTG GCACACATGA AACGCTGCTG GCGTATCTGG TGCGTCGCCT GCTGGAAAAC GGTGCTAACA CCTCGTTTGT TAACCGTATT GCCGACACCT CTTTGCCACT GGATGAACTG GTCGCCGATC CGGTCACTGC TGTAGAAAAA CTGGCGCAAC AGGAAGGGCA AACTGGATTA CCGCATCCGA AAATTCCCCT GCCGCGCGAT CTTTACGGTC ACGGGCGCGA CAACTCGGCA GGGCTGGATC TCGCTAACGA ACACCGTCTG GCCTCGCTCT CCTCTGCCCT GCTCAATAGT GCACTGCAAA AATGGCAGGC CTTGCCAATG CTGGAACAAC CGGTAGCGGC AGGTGAGATG TCGCCCGTTA TTAACCCTGC GGAACCGAAA GATATTGTGG GCTATGTGCG TGAAGCCACG CCGCGTGAAG TAGAACAGGC GCTGGAAAGT GCGGTTAATA ACGCGCCAAT CTGGTTTGCC ACTCCTCCGG CTGAACGCGC GGCAATTTTA CATCGCGCTG CCGTGCTAAT GGAAAGCCAG ATGCAGCAAC TGATTGGTAT TCTGGTGCGT GAGGCCGGAA AAACCTTCAG TAACGCCATT GCCGAAGTGC GCGAAGCGGT CGATTTTCTC CACTACTACG CCGGACAGGT GCGGGATGAT TTCGCTAACG AAACCCACCG TCCATTAGGG CCTGTGGTGT GTATCAGTCC GTGGAACTTC CCGCTGGCTA TTTTCACCGG GCAGATTGCT GCCGCACTGG CGGCAGGTAA CAGCGTGCTG GCAAAACCGG CAGAACAAAC GCCGCTGATT GCCGCGCAAG GGATCGCCAT TTTGCTGGAA GCGGGTGTAC CGCCAGGCGT GGTGCAATTG CTGCCAGGTC GGGGTGAAAC CGTGGGCGCG CAACTGACGG GTGATGATCG CGTGCGCGGG GTGATGTTTA CCGGTTCAAC CGAAGTCGCT ACGTTACTGC AACGTAATAT CGCCAGCCGC CTGGACGCTC AGGGTCGCCC TATTCCGCTC ATCGCTGAAA CCGGCGGCAT GAACGCGATG ATTGTCGATT CTTCAGCACT GACCGAACAG GTCGTCGTGG ATGTACTGGC CTCGGCGTTC GACAGTGCGG GTCAGCGTTG TTCGGCGCTG CGCGTGCTGT GCCTGCAAGA TGAGATTGCC GACCACACGT TGAAAATGCT GCGCGGCGCA ATGGCCGAAT GCCGGATGGG TAATCCGGGT CGCCTGACCA CCGATATCGG TCCGGTGATT GATAGCGAAG CGAAAGCCAA TATTGAGCGC CATATTCAGA CCATGCGTAG CAAAGGCCGT CCGGTGTTCC AGGCGGTGCG GGAAAACAGC GAAGATGCCC GTGAATGGCA AAGCGGCACC TTTGTCGCCC CGACGCTGAT CGAACTGGAT GACTTTGCCG AATTGCAAAA AGAGGTCTTT GGTCCGGTGC TGCATGTGGT GCGTTACAAC CGTAACCAGC TACCAGAGCT GATCGAGCAG ATTAACGCTT CCGGCTATGG TCTGACGCTT GGTGTCCATA CGCGTATTGA TGAAACCATC GCCCAGGTCA CTGGCTCGGC CCATGTTGGT AACCTGTATG TTAACCGTAA TATGGTGGGC GCAGTGGTGG GTGTGCAGCC ATTCGGCGGC GAAGGGTTGT CCGGTACCGG GCCGAAAGCA GGCGGTCCGC TCTATCTCTA CCGTCTGCTG GCGAATCGCC CGGAAAGTGC GCTGGCAGTG ACGCTCGCGC GTCAGGATGC AGAGTATCCG GTCGATGCAC AGTTGAAAGC AGCATTGACT CAGCCGCTAA ATGCACTGCG GGAATGGGCA GCAAATCGTC CAGAATTGCA GGCGTTATGT ACGCAATATG GCGAGCTGGC GCAGGCAGGA ACACAACGAT TGCTGCCGGG GCCGACGGGT GAACGCAACA CCTGGACGCT GCTGCCGCGT GAGCGCGTGT TGTGTATTGC CGATGATGAG CAGGATGCGC TGACTCAGCT CGCCGCCGTG CTGGCGGTGG GCAGCCAGGT ACTGTGGCCG GATGACGCGC TGCATCGTCA GCTAGTAAAG GCATTGCCAT CGGCAGTCAG CGAACGTATT CAACTGGCGA AAGCGGAAAA TATAACCGCT CAACCCTTTG ATGCGGTGAT CTTCCACGGT GATTCGGATC AGCTTCGCGC ATTGTGTGAA GCCGTTGCTG CGCGGGATGG CGCAATTGTT TCGGTGCAGG GTTTTGCCCG TGGCGAAAGC AATATCCTTC TGGAACGGCT GTATATCGAA CGTTCGCTGA GTGTGAATAC CGCTGCCGCT GGCGGTAACG CCAGTTTAAT GACGATCGGT TAA
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Protein sequence | MGTTTMGVKL DDATRERIKS AATRIDRTPH WLIKQAIFSY LEQLENSDTL PELPALLSGA ANESDEAPTP AEEPHQPFLD FAEQILPQSV SRAAITAAYR RPETEAVSML LEQARLPQPV AEQAHKLAYQ LADKLRNQKN ASGRAGMVQG LLQEFSLSSQ EGVALMCLAE ALLRIPDKAT RDALIRDKIS NGNWQSHIGR SPSLFVNAAT WGLLFTGKLV STHNEAILSR SLNRIIGKSG EPLIRKGVDM AMRLMGEQFV TGETIAEALA NARKLEEKGF RYSYDMLGEA ALTAADAQAY MVSYQQAIHA IGKASNGRGI YEGPGISIKL SALHPRYSRA QYDRVMEELY PRLKSLTLLA RQYDIGINID AEEADRLEIS LDLLEKLCFE PELAGWNGIG FVIQAYQKRC PLVIDYLIDL ATRSRRRLMI RLVKGAYWDS EIKRAQMDGL EGYPVYTRKV YTDVSYLACA KKLLAVPNLI YPQFATHNAH TLAAIYQLAG QNYYPGQYEF QCLHGMGEPL YEQVTGKVAD GKLNRPCRIY APVGTHETLL AYLVRRLLEN GANTSFVNRI ADTSLPLDEL VADPVTAVEK LAQQEGQTGL PHPKIPLPRD LYGHGRDNSA GLDLANEHRL ASLSSALLNS ALQKWQALPM LEQPVAAGEM SPVINPAEPK DIVGYVREAT PREVEQALES AVNNAPIWFA TPPAERAAIL HRAAVLMESQ MQQLIGILVR EAGKTFSNAI AEVREAVDFL HYYAGQVRDD FANETHRPLG PVVCISPWNF PLAIFTGQIA AALAAGNSVL AKPAEQTPLI AAQGIAILLE AGVPPGVVQL LPGRGETVGA QLTGDDRVRG VMFTGSTEVA TLLQRNIASR LDAQGRPIPL IAETGGMNAM IVDSSALTEQ VVVDVLASAF DSAGQRCSAL RVLCLQDEIA DHTLKMLRGA MAECRMGNPG RLTTDIGPVI DSEAKANIER HIQTMRSKGR PVFQAVRENS EDAREWQSGT FVAPTLIELD DFAELQKEVF GPVLHVVRYN RNQLPELIEQ INASGYGLTL GVHTRIDETI AQVTGSAHVG NLYVNRNMVG AVVGVQPFGG EGLSGTGPKA GGPLYLYRLL ANRPESALAV TLARQDAEYP VDAQLKAALT QPLNALREWA ANRPELQALC TQYGELAQAG TQRLLPGPTG ERNTWTLLPR ERVLCIADDE QDALTQLAAV LAVGSQVLWP DDALHRQLVK ALPSAVSERI QLAKAENITA QPFDAVIFHG DSDQLRALCE AVAARDGAIV SVQGFARGES NILLERLYIE RSLSVNTAAA GGNASLMTIG
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