Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1077 |
Symbol | helD |
ID | 5588374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 1103132 |
End bp | 1105186 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640924781 |
Product | DNA helicase IV |
Protein accession | YP_001462195 |
Protein GI | 157155618 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000255278 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGA AAGCGACAAC GCTTGGAAAA CGTCTGGCAC AGCACCCTTA CGATCGGGCG GTGATCCTCA ATGCCGGGAT TAAAGTCTCC GGCGATCGCC ACGAATACCT TATTCCTTTC AATCAATTAC TGGCGATTCA CTGTAAGCGC GGTCTGGTAT GGGGCGAGCT GGAATTTGTA CTGCCGGACG AAAAAGTGGT GCGTCTGCAC GGCACCGAAT GGGGCGAGAC GCAGCGTTTT TACCATCATC TTGATGCTCA CTGGCAGCGG TGGAGTGGCG AGATGAGCGA AATTGCGTCT GGTGTTTTAC GCCAGCAACT GGATTTGATT GCCACGCGCA CTGGAGAAAA TAAATGGCTG ACGCGTGAGC AAACCTCTGG CGTTCAGCAA CAAATCCGCC AGGCTATGTC GGCGTTGCCG TTGCCGGTTA ACCGACTGGA AGAATTCGAT AACTGCCGTG AGGCGTGGCG TAAATGTCAG GCCTGGTTGA AAGATATTGA AAGCGCTCGG TTGCAGCATA ACCAGGCGTA TACCGAAGCC ATGCTTACCG AGTATGCGGA TTTTTTCCGC CAGGTCGAGT CTTCACCGCT GAATCCGGCG CAGGCCCGGG CAGTCGTTAA TGGCGAGCAT TCTCTGTTAG TGCTGGCAGG TGCAGGAAGC GGAAAAACGT CGGTGCTGGT GGCCCGTGCA GGCTGGTTGC TGGCGCGTGG TGAAGCGTCC CCTGAGCAAA TTTTATTGCT GGCGTTTGGT CGCAAAGCCG CTGAAGAGAT GGACGAGCGT ATTCGCGAAC GGCTACATAC CGAAGACATT ACCGCACGCA CGTTTCATGC GCTGGCGCTG CATATTATTC AGCAGGGCAG CAAAAAAGTT CCGATAGTCA GCAAACTGGA AAATGATACC GCTGCCCGTC ATGAACTCTT TATTGCTGAG TGGCGCAAGC AATGCAGCGA AAAGAAAGCG CAGGCGAAGG GCTGGCGGCA ATGGCTGACG GAAGAAATGC AGTGGTCAGT GCCAGAAGGT AACTTCTGGG ATGATGAAAA ATTACAGCGT CGTCTTGCAT CACGCCTCGA TCGTTGGGTA AGTCTGATGC GGATGCACGG TGGTGCACAG GCAGAAATGA TTGCCAGTGC ACCCGAAGAG ATTCGCGATC TGTTCAGTAA ACGTATCAAG TTGATGGCCC CGTTATTAAA AGCCTGGAAA GGTGCGCTGA AGGCAGAAAA CGCTGTCGAT TTTTCGGGCC TTATTCATCA GGCGATTGTG ATTCTGGAGA AAGGTCGCTT TATCAGCCCG TGGAAGCATA TTCTGGTTGA TGAATTTCAG GATATCTCGC CGCAGCGGGC AGCGTTGTTA GCGGCATTAC GCAAGCAAAA CAGTCAGACG ACGTTGTTCG CCGTTGGTGA TGACTGGCAG GCGATTTACC GATTCAGCGG TGCGCAAATG TCGCTTACCA CCGCTTTCCA TGAAAACTTT GGTGAAGGCG ATCGCTGTGA TTTAGACACG ACTTACCGTT TTAACAGTCG TATCGGTGAG GTGGCAAACC GGTTTATTCA GCAGAACCCA GGCCAGTTGA AAAAGCCGCT AAACAGCTTA ACCAATGGAG ACGAAAAAGC CGTCACGTTA TTGGATGAGA GTCAACTTGA CGCTTTGCTG GATAAGCTCT CTGGTTATGC CAAACCGGAA GAGCGCATTC TGATCCTGGC GCGTTACCAT CACATGAGGC CTGCCAGCCT GGAAAAAGCG GCAACACGCT GGCCGAAGTT GCAAATCGAC TTTATGACCA TTCATGCCAG CAAAGGGCAA CAGGCGGATT ACGTCATCAT CGTTGGCTTG CAGGAGGGGA GTGATGGTTT TCCGGCTGCG GCGCGGGAGT CGATTATGGA AGAGGCGCTA CTGCCACCGG TTGAGGATTT CCCGGACGCT GAAGAACGGC GGTTAATGTA CGTGGCGCTG ACCCGGGCAC GCCATCGGGT ATGGGCACTG TTTAACAAAG AGAATCCCTC TCCCTTTGTG GAAATACTGA AAAATCTGGA TGTGCCGGTA GCGAGAAAAC CGTAA
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Protein sequence | MELKATTLGK RLAQHPYDRA VILNAGIKVS GDRHEYLIPF NQLLAIHCKR GLVWGELEFV LPDEKVVRLH GTEWGETQRF YHHLDAHWQR WSGEMSEIAS GVLRQQLDLI ATRTGENKWL TREQTSGVQQ QIRQAMSALP LPVNRLEEFD NCREAWRKCQ AWLKDIESAR LQHNQAYTEA MLTEYADFFR QVESSPLNPA QARAVVNGEH SLLVLAGAGS GKTSVLVARA GWLLARGEAS PEQILLLAFG RKAAEEMDER IRERLHTEDI TARTFHALAL HIIQQGSKKV PIVSKLENDT AARHELFIAE WRKQCSEKKA QAKGWRQWLT EEMQWSVPEG NFWDDEKLQR RLASRLDRWV SLMRMHGGAQ AEMIASAPEE IRDLFSKRIK LMAPLLKAWK GALKAENAVD FSGLIHQAIV ILEKGRFISP WKHILVDEFQ DISPQRAALL AALRKQNSQT TLFAVGDDWQ AIYRFSGAQM SLTTAFHENF GEGDRCDLDT TYRFNSRIGE VANRFIQQNP GQLKKPLNSL TNGDEKAVTL LDESQLDALL DKLSGYAKPE ERILILARYH HMRPASLEKA ATRWPKLQID FMTIHASKGQ QADYVIIVGL QEGSDGFPAA ARESIMEEAL LPPVEDFPDA EERRLMYVAL TRARHRVWAL FNKENPSPFV EILKNLDVPV ARKP
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