Gene EcE24377A_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_0975 
Symbol 
ID5586123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp995396 
End bp996544 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content52% 
IMG OID640924684 
Productputative MFS family transporter protein 
Protein accessionYP_001462098 
Protein GI157158970 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACGT ATACCCGGCC TGTCATGCTT TTGCTGTCTG GCCTGCTTTT GTTGACTCTG 
GCGATCGCGG TGTTAAATAC ACTCGTGCCG CTTTGGCTCG CCCAGGAACA CATGTCCACA
TGGCAGGTAG GCGTTGTCAG CTCATCCTAT TTTACCGGCA ACCTTGTCGG TACATTGCTG
ACAGGGTATG TCATTAAACG CATTGGCTTT AACCGCAGCT ATTATCTGGC CTCCTTCATT
TTTGCCGCTG GCTGTGCCGG CCTTGGCCTG ATGATTGGTT TCTGGAGCTG GTTGGCGTGG
CGTTTTGTCG CTGGCGTCGG CTGTGCCATG ATTTGGGTGG TTGTTGAGAG CGCGCTGATG
TGCAGTGGGA CGTCACGTAA CCGTGGGCGT TTGCTTGCTG CATACATGAT GGTTTATTAC
GTGGGAACGT TTTTAGGCCA GTTACTGGTC AGCAAGGTCT CAACCGAGCT GATGAGCGTA
TTGCCGTGGG TTACAGGTTT GACATTGGCA GGGATCTTAC CGCTGTTGTT TACGCGTGTG
CTGAATCAGC AGGCTGAAAA CCATGATTCG ACGTCAATTA CGGCAATGCT AAAACTCCGT
CAGGCGCGGC TTGGCGTGAA TGGCTGCATT ATCTCAGGAA TCGTTCTGGG ATCTCTATAT
GGCCTGATGC CGTTGTACCT CAATCACAAA GGGGTGAGCA ATGCCAGTAT TGGTTTCTGG
ATGGCGGTAC TGGTCAGTGC GGGTATCCTC GGACAATGGC CGATTGGACG TCTGGCGGAT
AAGTTTGGTC GACTGCTGGT GTTGCGTGTT CAGGTCTTTG TCGTCATTCT CGGCAGTATC
GCGATGCTTA GCCAGGCGGC GATGGCCCCT GCGTTATTCA TCCTCGGTGC CGCTGGCTTT
ACGCTATATC CGGTGGCGAT GGCCTGGGCT TGTGAGAAAG TTGAACATCA TCAACTGGTG
GCGATGAACC AGGCCTTACT GTTGAGCTAT ACCGTGGGAA GTCTGCTTGG CCCGTCATTT
ACCGCTATGC TAATGCAGAA TTTCTCCGAT AATTTATTGT TTATCATGAT CGCCAGCGTA
TCGTTTATCT ATTTGCTGAT GCTGCTGCGC AACGCCGGTC ATACGCCGAA ACCCGTTGCT
CACGTGTAA
 
Protein sequence
MSTYTRPVML LLSGLLLLTL AIAVLNTLVP LWLAQEHMST WQVGVVSSSY FTGNLVGTLL 
TGYVIKRIGF NRSYYLASFI FAAGCAGLGL MIGFWSWLAW RFVAGVGCAM IWVVVESALM
CSGTSRNRGR LLAAYMMVYY VGTFLGQLLV SKVSTELMSV LPWVTGLTLA GILPLLFTRV
LNQQAENHDS TSITAMLKLR QARLGVNGCI ISGIVLGSLY GLMPLYLNHK GVSNASIGFW
MAVLVSAGIL GQWPIGRLAD KFGRLLVLRV QVFVVILGSI AMLSQAAMAP ALFILGAAGF
TLYPVAMAWA CEKVEHHQLV AMNQALLLSY TVGSLLGPSF TAMLMQNFSD NLLFIMIASV
SFIYLLMLLR NAGHTPKPVA HV