| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0917 |
|---|
| Symbol | |
|---|
| ID | 5587816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 935545 |
|---|
| End bp | 936753 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640924627 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001462042 |
|---|
| Protein GI | 157157623 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTAA ATTCTTCACG TAATGCATTG AAACGCCGAA CCTGGGCGCT GTTTATGTTC
TTCTTTTTGC CAGGCCTGTT AATGGCGTCC TGGGCAACCC GTACGCCTGC TATCCGCGAT
ATTCTCTCTG TCTCGATCGC TGAAATGGGC GGTGTTCTCT TTGGTCTGTC GATCGGTTCG
ATGAGCGGTA TTCTCTGCTC GGCGTGGTTA GTGAAACGCT TTGGGACACG TAATGTCATC
CTGGTCACGA TGTCCTGCGC ATTGATCGGG ATGATGATAT TAAGTCTGGC ACTCTGGCTG
ACATCGCCCC TGCTCTTTGC CGTTGGTCTC GGCGTCTTTG GGGCAAGTTT TGGTTCTGCG
GAAGTGGCGA TAAACGTTGA AGGTGCCGCC GTTGAGCGAG AAATGAATAA AACGGTTTTG
CCAATGATGC ACGGTTTTTA TAGCCTGGGC ACGCTGGCAG GCGCTGGTGT CGGGATGGCA
CTGACGGCCT TTGGCGTTCC GGCAACGGTG CACATTTTAT TGGCGGCGCT GGTAGGAATC
GCGCCTATTT ATATCGCCAT TCAGGCAATC CCTGACGGTA CGGGCAAAAA TGCTGCCGAT
GGCACCCAGC ATGGTGAAAA AGGCGTACCT TTTTATCGCG ATATCCAGTT GCTGCTGATT
GGTGTTGTGG TGCTGGCGAT GGCCTTTGCC GAAGGTTCTG CCAACGACTG GTTACCCTTA
TTAATGGTTG ACGGTCACGG TTTTAGCCCT ACTTCCGGCT CGCTGATTTA TGCCGGTTTT
ACCCTGGGGA TGACTGTTGG ACGCTTTACC GGCGGTTGGT TCATCGACCG TTACAGTCGC
GTTGCCGTGG TTCGGGCCAG TGCACTAATG GGAGCGTTGG GTATTGGGCT GATTATTTTT
GTCGATAGCG CCTGGGTCGC TGGGGTGTCT GTTGTACTCT GGGGACTGGG TGCCTCGCTG
GGCTTCCCGC TGACCATTTC TGCCGCCAGC GATACCGGCC CCGATGCACC AACCCGCGTC
AGTGTGGTAG CAACGACCGG TTATCTGGCT TTCCTCGTCG GGCCGCCGCT GCTGGGCTAT
CTCGGCGAAC ATTATGGATT ACGTAGTGCA ATGCTGGTTG TACTGGCGCT GGTTATTCTC
GCGGCTATTG TCGCGAAAGC CGTCGCCAAA CCCGATACCA AAACGCAGAC GGCGATGGAG
AATAGTTGA
|
|---|
| Protein sequence | MTVNSSRNAL KRRTWALFMF FFLPGLLMAS WATRTPAIRD ILSVSIAEMG GVLFGLSIGS
MSGILCSAWL VKRFGTRNVI LVTMSCALIG MMILSLALWL TSPLLFAVGL GVFGASFGSA
EVAINVEGAA VEREMNKTVL PMMHGFYSLG TLAGAGVGMA LTAFGVPATV HILLAALVGI
APIYIAIQAI PDGTGKNAAD GTQHGEKGVP FYRDIQLLLI GVVVLAMAFA EGSANDWLPL
LMVDGHGFSP TSGSLIYAGF TLGMTVGRFT GGWFIDRYSR VAVVRASALM GALGIGLIIF
VDSAWVAGVS VVLWGLGASL GFPLTISAAS DTGPDAPTRV SVVATTGYLA FLVGPPLLGY
LGEHYGLRSA MLVVLALVIL AAIVAKAVAK PDTKTQTAME NS
|
|---|
| |