Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0720 |
Symbol | kdpE |
ID | 5587709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 742568 |
End bp | 743245 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640924436 |
Product | DNA-binding transcriptional activator KdpE |
Protein accession | YP_001461856 |
Protein GI | 157155566 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0669037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACAAACG TTCTGATTGT TGAAGATGAA CAGGCTATTC GTCGCTTTCT GCGCACGGCG CTGGAGGGCG ACGGGATGCG CGTCTATGAG GCCGAAACGC TGCAACGCGG CTTGCTGGAA GCGGCTACCC GTAAGCCAGA TTTGATTATT CTCGATCTCG GCCTGCCCGA TGGTGATGGG ATTGAGTTTA TCCGCGACCT GCGCCAGTGG AGCGCGGTGC CGGTGATTGT GCTTTCCGCA CGCAGCGAAG AGAGCGACAA AATCGCCGCG CTGGATGCCG GAGCGGATGA TTATCTGAGT AAGCCGTTTG GCATTGGCGA ATTGCAGGCC CGTCTGCGCG TCGCTTTACG CCGCCACTCC GCCACCGCCG CGCCCGATCC GCTGGTGAAA TTTTCCGATG TTACCGTCGA TTTAGCCGCC CGCGTGATTC ACCGGGGTGA GGAAGAGGTG CATCTCACGC CGATTGAGTT CCGCCTGCTG GCGGTGCTGC TGAATAATGC CGGGAAAGTG CTCACCCAGC GCCAGTTACT CAATCAGGTG TGGGGGCCAA ACGCGGTCGA ACACAGTCAC TATTTGCGTA TTTATATGGG ACATCTGCGA CAAAAACTGG AACAGGATCC CGCTCGCCCC CGCCATTTCA TTACTGAAAC CGGTATTGGG TATCGGTTTA TGCCATGA
|
Protein sequence | MTNVLIVEDE QAIRRFLRTA LEGDGMRVYE AETLQRGLLE AATRKPDLII LDLGLPDGDG IEFIRDLRQW SAVPVIVLSA RSEESDKIAA LDAGADDYLS KPFGIGELQA RLRVALRRHS ATAAPDPLVK FSDVTVDLAA RVIHRGEEEV HLTPIEFRLL AVLLNNAGKV LTQRQLLNQV WGPNAVEHSH YLRIYMGHLR QKLEQDPARP RHFITETGIG YRFMP
|
| |