Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0700 |
Symbol | nagD |
ID | 5587832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 722814 |
End bp | 723566 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640924416 |
Product | UMP phosphatase |
Protein accession | YP_001461836 |
Protein GI | 157155303 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457 [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000385389 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATTA AAAATGTAAT TTGCGATATC GACGGCGTGC TGATGCACGA TAACGTCGCC GTACCGGGTG CAGCGGAATT TTTGCACGGG ATTATGGATA AAGGCCTGCC GCTGGTGTTG CTGACCAACT ATCCTTCGCA GACCGGGCAA GATCTGGCGA ACCGCTTTGC CACTGCCGGT GTCGATGTGC CGGATAGCGT GTTTTATACC TCTGCGATGG CGACTGCCGA TTTCCTGCGT CGCCAGGAAG GCAAGAAAGC GTATGTGGTG GGCGAAGGCG CACTGATTCA TGAACTGTAC AAAGCCGGTT TCACTATTAC CGATGTGAAC CCTGATTTTG TGATTGTTGG CGAAACGCGT TCCTACAACT GGGACATGAT GCATAAAGCG GCCTATTTCG TCGCTAACGG TGCACGCTTT ATCGCCACCA ACCCGGACAC CCACGGGCGC GGTTTTTATC CCGCTTGTGG CGCGTTGTGT GCAGGGATTG AGAAAATCTC CGGGCGCAAA CCGTTCTATG TTGGTAAGCC CAGCCCGTGG ATCATCCGCG CGGCATTAAA CAAAATGCAG GCGCATTCGG AAGAAACGGT GATTGTCGGC GATAACTTGC GCACCGACAT TCTGGCGGGC TTCCAGGCGG GTCTGGAGAC GATTCTGGTG CTTTCTGGTG TTTCATCGCT CGACGATATC GACAGTATGC CGTTCCGCCC AAGCTGGATT TACCCGTCGG TCGCTGAAAT CGACGTTATC TGA
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Protein sequence | MTIKNVICDI DGVLMHDNVA VPGAAEFLHG IMDKGLPLVL LTNYPSQTGQ DLANRFATAG VDVPDSVFYT SAMATADFLR RQEGKKAYVV GEGALIHELY KAGFTITDVN PDFVIVGETR SYNWDMMHKA AYFVANGARF IATNPDTHGR GFYPACGALC AGIEKISGRK PFYVGKPSPW IIRAALNKMQ AHSEETVIVG DNLRTDILAG FQAGLETILV LSGVSSLDDI DSMPFRPSWI YPSVAEIDVI
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