| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0692 |
|---|
| Symbol | ubiF |
|---|
| ID | 5588753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 718592 |
|---|
| End bp | 719767 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640924408 |
|---|
| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
|---|
| Protein accession | YP_001461834 |
|---|
| Protein GI | 157158593 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000811141 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATC AACCAACGGA AATTGCCATT GTCGGCGGAG GAATGGTCGG CGGCGCACTG
GCGCTGGGGC TGGCACAGCA CGGATTTTCG GTAACGGTGA TCGAGCACGC AGAACCTGCA
CCGTTTGTCG CTGATAGCCA ACCGGACGTG CGGATCTCGG CGATCAGCGC CGCATCGGTA
TCATTGCTTA AAGGGTTAGG GGTCTGGGAT GCAGTACAGG CTATGCGTTG CCATCCTTAC
CGCAGACTGG AAACGTGGGA GTGGGAAACG GCGCATGTGA TGTTTGACGC CGCTGAACTT
AAGCTGCCGC TGCTTGGCTA TATGGTGGAA AACACCGTCC TGCAACAGGC ATTGTGGCAG
GCGCTGGAAG CTCATCCGAA AGTAACGTTA CGTGTGCCAG GCTCGCTGAT TGCATTACAT
CGAGATAATG ATCTTCAGGA GCTGGAACTG AAGGGCGGTG AAGTGATTCG CGCGAAGCTG
GTGATTGGTG CTGACGGCGC AAATTCGCAG GTGCGGCAGA TGGCGGGAAT TGGCGTTCAT
GCCTGGCAGT ATGCGCAGTC GTGTATGTTG ATTAGCGTAC AGTGTGAGAA CGATCCCGGC
GACAGCACCT GGCAGCAATT TACCCCGGAC GGACCGCGTG CGTTTCTGCC GTTGTTTGAT
AACTGGGCAT CGCTGGTGTG GTATGACTCT CCGGTGCGTA TTCGCCAGTT GCAGAATATG
AATATGGCGC AACTCCAGGC GGAAATCGCG AAGCATTTCC CGTCGCGTCT GGGTTACGTT
ACACCGCTTG CCGCTGGTGC GTTTCCGCTG ACGCGCCGAC ATGCGTTGCA GTATGTGCAG
CCGGGGCTTG CGCTGGTGGG CGATGCCGCG CATACCATCC ATCCGCTGGC GGGGCAGGGG
GTGAATCTTG GTTATCGTGA TGTCGATGCC CTGATTGATG TTCTGGTGAA TGCCCGCAGC
TACGGTGAAG CGTGGGCCAG TTATCCTGTC CTCAAGCGTT ACCAGATGCG GCGCATGGCG
GATAACTTCA TTATGCAAAG TGGTATGGAT CTGTTTTATG CCGGATTCAG TAATAATCTG
CCGCCGCTGC GTTTTGTGCG TAATCTTGGT TTGATGGCGG CGGAGCGTGC TGGCGTGTTG
AAACGTCAGG CGCTGAAATA TGCGTTAGGG TTGTAG
|
|---|
| Protein sequence | MTNQPTEIAI VGGGMVGGAL ALGLAQHGFS VTVIEHAEPA PFVADSQPDV RISAISAASV
SLLKGLGVWD AVQAMRCHPY RRLETWEWET AHVMFDAAEL KLPLLGYMVE NTVLQQALWQ
ALEAHPKVTL RVPGSLIALH RDNDLQELEL KGGEVIRAKL VIGADGANSQ VRQMAGIGVH
AWQYAQSCML ISVQCENDPG DSTWQQFTPD GPRAFLPLFD NWASLVWYDS PVRIRQLQNM
NMAQLQAEIA KHFPSRLGYV TPLAAGAFPL TRRHALQYVQ PGLALVGDAA HTIHPLAGQG
VNLGYRDVDA LIDVLVNARS YGEAWASYPV LKRYQMRRMA DNFIMQSGMD LFYAGFSNNL
PPLRFVRNLG LMAAERAGVL KRQALKYALG L
|
|---|
| |