| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0547 |
|---|
| Symbol | |
|---|
| ID | 5587684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 572588 |
|---|
| End bp | 574042 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640924269 |
|---|
| Product | allantoin permease |
|---|
| Protein accession | YP_001461696 |
|---|
| Protein GI | 157156624 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
|---|
| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATC AGAGAAAACT ATTCCAGCAA CGCGGCTATA GCGAAGATCT ATTGCCGAAA
ACGCAAAGCC AGCGGACCTG GAAAACATTT AACTATTTTA CCTTATGGAT GGGTTCGGTT
CATAACGTTC CCAATTATGT GATGGTCGGC GGCTTTTTTA TTCTCGGCTT GTCTACCTTT
AGTATTATGC TGGCAATTAT CCTCAGCGCC TTTTTCATTG CCGCGGTAAT GGTATTAAAC
GGCGCTGCGG GCAGTAAATA CGGCGTACCG TTTGCCATGA TCCTGCGTGC TTCTTACGGC
GTACGTGGCG CACTGTTTCC CGGATTATTA AGAGGCGGTA TTGCTGCCAT TATGTGGTTT
GGCCTGCAAT GTTACGCGGG GTCACTGGCC TGCTTGATTC TGATTGGCAA AATCTGGCCG
GGATTTTTAA CTCTCGGTGG TGATTTCACG CTGTTAGGGC TTTCTCTACC GGGCTTAATT
ACTTTCTTAC TCTTCTGGCT GGTCAACGTT GGTATAGGTT TTGGCGGTGG CAAAGTTTTA
AATAAATTCA CTGCCATTCT TAACCCGTGC ATCTATATCG TTTTCGGCGG CATGGCGATT
TGGGCGATTT CACTGGTCGG GATCGGTCCA ATCTTTGACT ACATTCCGAG CGGTATTCAG
AAAGCAGAAA ACAGTGGATT CTTGTTCCTG GTGGTGATTA ACGCGGTAGT TGCGGTCTGG
GCGGCACCGG CGGTGAGCGC ATCCGACTTT ACGCAAAACG CCCACTCGTT TCGTGAGCAA
GCGCTGGGGC AAACGCTGGG TTTAGTTGTG GCCTATATTC TGTTTGCGGT CGCTGGGGTA
TGTATTATTG CCGGAGCCAG TATTCACTAC GGCGCTGACA CCTGGAACGT GCTGGATATT
GTTCAGCGTT GGGACAGCCT GTTTGCCTCG TTCTTTGCGG TACTGGTTAT TCTGATGACG
ACTATTTCCA CTAACGCCAC CGGTAATATT ATTCCGGCCG GTTATCAGAT TGCTGCCATT
GCACCGACAA AACTGACCTA TAAAAACGGC GTACTGATTG CCAGTATTAT CAGCCTGCTG
ATCTGCCCGT GGAAATTAAT GGAAAATCAG GACAGTATTT ATCTGTTCCT CGATATCATC
GGCGGAATGC TGGGTCCGGT AATTGGTGTC ATGATGGCAC ATTATTTTGT GGTGATGCGC
GGACAAATTA ATCTTGATGA ACTGTATACC GCACCTGGCG ATTATAAATA TTACGATAAC
GGTTTTAACC TCACTGCGTT TTCAGTAACT CTGGTGGCCG TTATTTTATC TCTTGGCGGT
AAGTTTATTC ACTTTATGGA ACCGTTATCG CGTGTTTCAT GGTTTGTCGG CGTCATCGTC
GCCTTTGCGG CCTACGCCTT ATTAAAGAAA CGTACAACAG CAGAAAAAAC AGGAGAGCAA
AAAACCATAG GTTAA
|
|---|
| Protein sequence | MEHQRKLFQQ RGYSEDLLPK TQSQRTWKTF NYFTLWMGSV HNVPNYVMVG GFFILGLSTF
SIMLAIILSA FFIAAVMVLN GAAGSKYGVP FAMILRASYG VRGALFPGLL RGGIAAIMWF
GLQCYAGSLA CLILIGKIWP GFLTLGGDFT LLGLSLPGLI TFLLFWLVNV GIGFGGGKVL
NKFTAILNPC IYIVFGGMAI WAISLVGIGP IFDYIPSGIQ KAENSGFLFL VVINAVVAVW
AAPAVSASDF TQNAHSFREQ ALGQTLGLVV AYILFAVAGV CIIAGASIHY GADTWNVLDI
VQRWDSLFAS FFAVLVILMT TISTNATGNI IPAGYQIAAI APTKLTYKNG VLIASIISLL
ICPWKLMENQ DSIYLFLDII GGMLGPVIGV MMAHYFVVMR GQINLDELYT APGDYKYYDN
GFNLTAFSVT LVAVILSLGG KFIHFMEPLS RVSWFVGVIV AFAAYALLKK RTTAEKTGEQ
KTIG
|
|---|
| |