| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0527 |
|---|
| Symbol | |
|---|
| ID | 5586387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 549346 |
|---|
| End bp | 549804 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640924250 |
|---|
| Product | nodulation efficiency family protein |
|---|
| Protein accession | YP_001461677 |
|---|
| Protein GI | 157158261 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAGT TAATGGTCGT TCATCCACAT ATTTTCTGGC TCAGTCTCGG CGGTTTGCTG
CTGGCAGCCG AGATGCTGGG CGGAAATGGT TATTTGTTGT GGAGCGGCGT GGCAGCGGTG
ATTACCGGCC TGGTGGTCTG GCTGGTGCCG CTGGGTTGGG AGTGGCAAGG GGTAATGTTT
GCCATCCTGA CGCTGCTCGC CGCCTGGCTG TGGTGGAAAT GGTTGTCGCG GCGGGTGCGC
GAACAAAAGC ACAGCGATAG TCATTTAAAC CAGCGCGGGC AGCAGCTGAT TGGCCGACGT
TTTGTGCTGG AATCTCCGCT GGTCAACGGG CGCGGTCATA TGCGCGTCGG TGACAGTTCA
TGGCCTGTCA GCGCCAGCGA GGATCTCGGT GCAGGTACGC ATGTTGAAGT CATTGCGATA
GAAGGGATAA CCCTACATAT CCGAGCAGTC TCGTCTTAA
|
|---|
| Protein sequence | MMELMVVHPH IFWLSLGGLL LAAEMLGGNG YLLWSGVAAV ITGLVVWLVP LGWEWQGVMF
AILTLLAAWL WWKWLSRRVR EQKHSDSHLN QRGQQLIGRR FVLESPLVNG RGHMRVGDSS
WPVSASEDLG AGTHVEVIAI EGITLHIRAV SS
|
|---|
| |