Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0423 |
Symbol | araJ |
ID | 5590114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 444175 |
End bp | 445443 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640924147 |
Product | MFS transport protein AraJ |
Protein accession | YP_001461574 |
Protein GI | 157156635 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCCTTGC TGGTCGTTAT CCTGCAAGCT ATCACTTTAT TGGCTACGGT GATTGGTAGC CGTTCTGGTA GTTGTGATGG TGGTATGAAA AAAGTCATTT TATCTTTGGC TCTGGGCACG TTTGGTTTGG GGATGGCCGA ATTTGGCATT ATGGGCGTGC TCACGGAGCT GGCGCATAAC GTAGGAATTT CGATTCCTGC TGCCGGGCAT ATGATCTCGT ATTATGCGCT GGGAGTGGTG GTCGGTGCGC CAATCATCGC ACTCTTTTCC AGCCGCTACT CACTCAAACA TATCTTGTTG TTTCTGGTGG CGTTGTGCGT CATTGGCAAC GCCATGTTCA CGCTCTCTTC GTCTTACCTG ATGCTTGCCA TTGGTCGCCT GGTTTCCGGC TTTCCGCATG GCGCATTTTT TGGCGTCGGC GCGATCGTGT TATCAAAAAT TATCAAACCC GGAAAAGTCA CCGCCGCCGT GGCGGGGATG GTTTCCGGGA TGACAGTCGC CAATTTGCTG GGCATTCCGC TGGGAACGTA TTTAAGTCAG GAATTTAGCT GGCGTTACAC CTTTTTATTG ATCGCTGTTT TTAATATTGC GGTGATGGCA TCGGTCTATT TTTGGGTGCC GGATATTCGC GACGAGGCGA AAGGAAAGCT GCGCGAACAA TTTCACTTTT TACGCAGCCC GGCCCCGTGG TTAATTTTCG CCGCCACGAT GTTTGGCAAC GCAGGTGTGT TTGCCTGGTT CAGCTACGTA AAGCCATACA TGATGTTTAT TTCCGGTTTT TCGGAAACGG CGATGACCTT TATTATGATG TTAGTTGGGC TAGGGATGGT GTTGGGAAAT ATGCTAAGTG GCAGGATTTC AGGACGTTAT TCACCACTGC GCATTGCAGC AGTGACTGAC TTTATAATTG TACTGGCACT GCTGATGCTC TTTTTCTGCG GCGGCATGAA AACAACGTCG CTTATTTTTG CTTTTATTTG TTGCGCGGGA TTATTTGCCC TTTCAGCACC TCTGCAAATA TTATTACTAC AAAATGCCAA AGGCGGAGAG TTATTAGGTG CCGCAGGTGG GCAAATAGCG TTTAACCTTG GTAGCGCCGT CGGCGCATAT TGCGGTGGTA TGATGCTGAC GCTGGGGCTG GCATATAATT ACGTGGCGCT GCCTGCCGCC CTGCTTTCGT TTGCTGCGAT GTCGTCATTG CTGCTGTATG GTCGCTATAA GCGCCAGCAA GCGGCGGATA GTCCGGTGCT GGCGAAACCA CTGGGGTAG
|
Protein sequence | MALLVVILQA ITLLATVIGS RSGSCDGGMK KVILSLALGT FGLGMAEFGI MGVLTELAHN VGISIPAAGH MISYYALGVV VGAPIIALFS SRYSLKHILL FLVALCVIGN AMFTLSSSYL MLAIGRLVSG FPHGAFFGVG AIVLSKIIKP GKVTAAVAGM VSGMTVANLL GIPLGTYLSQ EFSWRYTFLL IAVFNIAVMA SVYFWVPDIR DEAKGKLREQ FHFLRSPAPW LIFAATMFGN AGVFAWFSYV KPYMMFISGF SETAMTFIMM LVGLGMVLGN MLSGRISGRY SPLRIAAVTD FIIVLALLML FFCGGMKTTS LIFAFICCAG LFALSAPLQI LLLQNAKGGE LLGAAGGQIA FNLGSAVGAY CGGMMLTLGL AYNYVALPAA LLSFAAMSSL LLYGRYKRQQ AADSPVLAKP LG
|
| |