Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0357 |
Symbol | prpC |
ID | 5589480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 385696 |
End bp | 386865 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640924082 |
Product | methylcitrate synthase |
Protein accession | YP_001461509 |
Protein GI | 157157579 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGACA CAACGATCCT GCAAAACAGT ACCCATGTCA TTAAACCGAA AAAATCTGTG GCACTTTCTG GCGTTCCGGC GGGCAATACG GCGCTCTGCA CCGTGGGTAA AAGCGGCAAT GACCTGCATT ACCGCGGCTA CGATATTCTT GATCTGGCGG AACATTGCGA ATTTGAAGAA GTGGCGCATC TGCTGATCCA CGGCAAACTG CCGACCCGTG ACGAACTCGC CGCTTACAAA ACGAAACTGA AAGCCCTGCG CGGTTTACCG GCTAACGTGC GTACCGTGCT GGAAGCCTTA CCGGCGGCGT CACACCCGAT GGATGTTATG CGCACCGGCG TTTCCGCGCT CGGCTGCACG CTGCCAGAAA AAGAGGGACA TACCGTCTCT GGCGCGCGGG ATATTGCCGA CAAACTACTG GCATCACTTA GCTCGATTCT CCTTTATTGG TATCACTACA GTCACAACGG CGAACGCATC CAGCCGGAAA CCGATGACGA CTCCATCGGT GGTCACTTCC TGCATCTGCT GCACGGCGAA AAGCCATCGC AAAGCTGGGA AAAGGCGATG CATATTTCGC TAGTGCTGTA CGCCGAACAC GAGTTTAACG CCTCCACCTT TACCAGTCGG GTGATTGCGG GCACTGGCTC TGATATGTAT TCCGCGATTA TTGGCGCGAT TGGCGCACTG CGCGGGCCGA AACACGGCGG AGCGAATGAA GTGTCGCTGG AGATCCAGCA ACGCTACGAA ACGCCGGACG AAGCCGAAGC CGATATCCGC AAGCGGGTGG AAAACAAAGA AGTGGTCATT GGTTTTGGTC ATCCGGTTTA TACCATCGCC GACCCGCGCC ACCAGGTGAT CAAACGTGTG GCGAAGCAGC TCTCGCAGGA AGGCGGCTCG TTGAAGATGT ACAACATCGC CGATCGCCTG GAAACGGTGA TGTGGGAGAG CAAAAAGATG TTCCCCAATC TCGACTGGTT CTCTGCTGTT TCCTACAACA TGATGGGCGT TCCCACCGAG ATGTTCACAC CACTGTTTGT CATCGCCCGT GTCACCGGCT GGGCGGCGCA CATCATTGAA CAACGTCAGG ACAACAAAAT TATCCGTCCT TCCGCCAATT ATGTTGGACC GGAAGACCGC CAGTTTGTCG CGCTGGATAA GCGCCAGTAA
|
Protein sequence | MSDTTILQNS THVIKPKKSV ALSGVPAGNT ALCTVGKSGN DLHYRGYDIL DLAEHCEFEE VAHLLIHGKL PTRDELAAYK TKLKALRGLP ANVRTVLEAL PAASHPMDVM RTGVSALGCT LPEKEGHTVS GARDIADKLL ASLSSILLYW YHYSHNGERI QPETDDDSIG GHFLHLLHGE KPSQSWEKAM HISLVLYAEH EFNASTFTSR VIAGTGSDMY SAIIGAIGAL RGPKHGGANE VSLEIQQRYE TPDEAEADIR KRVENKEVVI GFGHPVYTIA DPRHQVIKRV AKQLSQEGGS LKMYNIADRL ETVMWESKKM FPNLDWFSAV SYNMMGVPTE MFTPLFVIAR VTGWAAHIIE QRQDNKIIRP SANYVGPEDR QFVALDKRQ
|
| |