| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0354 |
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| Symbol | prpR |
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| ID | 5587781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 382937 |
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| End bp | 384523 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640924079 |
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| Product | propionate catabolism operon regulatory protein PrpR |
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| Protein accession | YP_001461506 |
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| Protein GI | 157159324 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACATC CACCACGGCT TAATGACGAC AAACCGGTTA TCTGGACGGT ATCTGTAACG
CGCCTGTTCG AGCTGTTTCG CGATATCAGC CTCGAGTTTG ATCACCTGGC GAACATTACC
CCTATTCAGC TTGGCTTTGA AAAAGCAGTG ACCTACATCC GCAAGAAACT GGCAAACGAA
CGCTGTGACG CCATCATCGC TGCTGGCTCT AACGGCGCGT ACCTGAAAAG CCGCCTGTCA
GTGCCAGTTA TTTTGATTAA ACCGAGCGGC TACGATGTGT TACAGGCACT GGCAAAAGCC
GGAAAACTCA CCTCTTCTAT CGGCGTTGTC ACCTATCAGG AAACCATTCC AGCGCTGGTG
GCGTTTCAAA AAACCTTTAA TCTGCGCCTC GATCAACGTA GCTACATTAC CGAAGAAGAC
GCCCGCGGGC AGATTAACGA GCTGAAAGCT AACGGCACTG AAGCGGTGGT CGGCGCGGGG
CTGATTACCG ATCTGGCAGA AGAAGCCGGA ATGACCGGAA TTTTTATCTA TTCCGCCGCC
ACCGTGCGCC AGGCGTTCAG CGATGCGCTG GATATGACGC GCATGTCGTT ACGCCATAAC
ACTCACGATG CCACCCGCAA CGCCCTGAGA ACTCGTTACG TGCTGGGCGA TATGCTCGGT
CAATCACCAC AGATGGAACA AGTACGGCAG ACTATTTTGC TGTATGCCCG CTCCAGTGCA
GCGGTGTTGA TTGAGGGGGA AACGGGGACG GGCAAAGAGC TGGCGGCCCA GGCGATTCAT
CGGGAATATT TTGCCCGCCA CGATGCGCGA CAGGGCAAAA AGTCGCATCC GTTTGTTGCC
GTCAACTGCG GGGCGATAGC CGAATCGCTG CTGGAAGCGG AGCTGTTTGG CTATGAGGAA
GGGGCGTTTA CCGGCTCGCG ACGCGGAGGT CGCGCCGGGC TGTTCGAAAT TGCCCACGGC
GGTACGCTGT TTCTGGATGA GATTGGCGAA ATGCCGCTAC CTTTGCAGAC TCGCCTGTTA
CGGGTGCTGG AAGAAAAAGA GGTCACCCGC GTCGGCGGGC ATCAGCCTGT TCCGGTAGAT
GTACGGGTCA TTAGCGCCAC TCACTGCAAG CTGGAAGAAG ATATGCAGCA AGGACGTTTT
CGCCGTGATC TGTTTTATCG GCTGAGTATT TTGCGTCTGC AATTGCCACC ACTGCGCGAG
CGGGTGGCGG ATATTCTTCC GCTGGCGGAA AGCTTTTTGA AAGTGTCTCT GGCGGCGCTC
TCCGCCCCGT TTTCTGCCGC ATTACGCCAG GGATTACAGG CAAGCGAAAC CGTGCTGGTG
CACTACGACT GGCCAGGTAA TATTCGTGAA CTGCGCAATA TGATGGAGCG ACTGGCGCTA
TTTTTAAGTG TGGAACCGAC GCCGGATTTA ACGCCGCAAT TTTTGCAGCT GCTACTGCCG
GAACTGGCGC GCGAGTCGGC GAAAACTCCC GCTCCACGCT TACTGACACC ACAACAGGCA
CTGGAGAAAT TTAATGGCGA TAAAACAGCA GCGGCGAATT ATTTAGGCAT CAGCCGGACG
ACGTTCTGGC GGCGGCTGAA AAGCTGA
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| Protein sequence | MAHPPRLNDD KPVIWTVSVT RLFELFRDIS LEFDHLANIT PIQLGFEKAV TYIRKKLANE
RCDAIIAAGS NGAYLKSRLS VPVILIKPSG YDVLQALAKA GKLTSSIGVV TYQETIPALV
AFQKTFNLRL DQRSYITEED ARGQINELKA NGTEAVVGAG LITDLAEEAG MTGIFIYSAA
TVRQAFSDAL DMTRMSLRHN THDATRNALR TRYVLGDMLG QSPQMEQVRQ TILLYARSSA
AVLIEGETGT GKELAAQAIH REYFARHDAR QGKKSHPFVA VNCGAIAESL LEAELFGYEE
GAFTGSRRGG RAGLFEIAHG GTLFLDEIGE MPLPLQTRLL RVLEEKEVTR VGGHQPVPVD
VRVISATHCK LEEDMQQGRF RRDLFYRLSI LRLQLPPLRE RVADILPLAE SFLKVSLAAL
SAPFSAALRQ GLQASETVLV HYDWPGNIRE LRNMMERLAL FLSVEPTPDL TPQFLQLLLP
ELARESAKTP APRLLTPQQA LEKFNGDKTA AANYLGISRT TFWRRLKS
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