Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0332 |
Symbol | |
ID | 5589482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 359500 |
End bp | 363483 |
Gene Length | 3984 bp |
Protein Length | 1327 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640924057 |
Product | putative outer membrane autotransporter |
Protein accession | YP_001461485 |
Protein GI | 157158257 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TATATCGGCT AAAGTGGAAC AGGTCCCGTA ACTGTTGGAG CGTCTGCTCG GAGCTGGGGA GCAGAGTAAA AGGAAAAAAG TCCCGGGCTG TTTTAATTAG CGCGATAAGT TTATATTCAT CTCTGGTATT CGCCGATGAT GTCATCGTAA ACCAGGATAA AACTATTGAT TTTGGCAAAG AGAACCAGAG CATCGATTAC CGTATTACGG TGACTGACAA TGCCAATCTG GTAATCAATA CGACAGATAC TTCCCGTCCG CGTCTGACTC TCGCTTCTGG TGGTGGGTTG GATATTACCG GAGGAAAGGT AACAATCAAT GGCCCGCTTA ACTTTTTGCT GAAAGGTACG GGGTTCCTGA ATGTCTCCAA TGCTGGCAGC GAGTTATATG CTGATGATTT GTATGAGTCA AACTCAGGCA TGAGACATGA TCAAGGCTAT TTTAATGTCT CCAATGGCGG CAAAATTCAT GTTAAGGGCA CCAGTCGTCT GACTTATACG CAGGGGAATG TAAGCGGCGG AGGTAGTCAG GTAAATGCAG GGACCTTCTT TATGGGCGTT TACGGCGGAT ATGGCGGTAA TCAGTTCCTG TCGGTTAATA ACGGTGGTGA AGTTAATGCT CGTGAACATA TTAGCCTGGG TTATTACGAC CAACGTTCTG ATACAACATT AGTCGTATCA GATGGAGGTA AAATATCCGC ACCGAAAATT AGTTTAAGCA CCAACTCTGA GTTAGCGTTA GGTGCACAGG AAGGAAGTGC TGCGAAGGCT GCAGGGATTA TTGATGCCGA AAAAATTGAG TTTGTGTGGG CAAAGACATC CGATAAGAAA ATCACCTTAA ACCACACGGA TAAAAACGCG ACTATTTCCG CGGATATTGT CAGTGGCAGC GAGGGCCTGG GCTATATCAA TGCGCTCAAT GGCACGACTT ACTTAACCGG TGATAACTCT GCCTTTAGTG GTAAAGTCAA AATTGAGCAA AATGGCGCTT TAGGGATCAC CCAAAATATA GGTACAGCAG AGATCAACAA CCGCGGGAAA TTACACCTGA AGGCTGACGA TAGCATGACC TTTGCCAATA AGATTTCCGG CAATGGTACA ATAAGTATCG ACAGTGGGAC AGTGGCACTG ACCGGCAATA ACTATGCATT CAGCGGATAT ATTGATGTCG CTTCTGGTGC TGTCGCGGTT ATTTCTGAAG ACAAGAACAT CGGCCGTGCG GACCTGGATG TTGATGGCAA ACTGCAAATC AATGCCAATA AAGATTGGGT ATTTGATAAC GATCTTCAAG GTAGAGGTAT TGTTGAAATA AACATGGGGA ATCACGAATT CTCCTTCGAT GAGTTTGCTT ATACAGACTG GTTCCAGGGT TCACTGGCGT TCCAGAACAC GACATTTAAC CTGGAAAAGA ATGCTGAGTT TCTGCAGAGA GGCGGGATCA CTGCGGGTCA GGGAAGCCAG GTAACAGTGG GTAAGGGCGC TCACTCCATT AGCACTTTGG GATTCTCCGG CGGAACCGTT GATTTTGGTG CCCTGACAGC AGGTGCACAG ATGACAGAAG GGACGGTCAA CGTTAGTAAA ACGCTGGATT TGCGCGGCGA GGGTGTGATT CAGGTTTCTG ACAGTGACGT TGTAAGCTCA GTATCTCGTG ATATTGACTC TGCGTTATCG CTCACTGAAG TCGATGATGG TAACAGCACC ATTAAGTTGG TTGATGCGCA AGGTGCGGAA GTTCTGGGCG ATGCGGGCAA TCTGCAATTG CAGGATAAAA ATGGGCAAAT CCTCTCCAGC AGTGCCCAAC GTGATATTCA GCAGAATGGG CAAAAAGCGG CCGTCGGCAC TTACGACTAT CGTCTGACGA GTGGGGTAAA CAATGACGGT CTGTATATCG GTTACGGCCT GACCCAGCTT GATTTATACG CTACCGACAG CGATGCTCTG GTGCTGAGCT CTAACGGTAA AAGCGAGAAT GCCGCCGATC TCAGCGCAAA GATTACCGGC AGTGGTGACC TGGCATTCAG CAGCCAGAAG GGTCAGACCG TATCGCTTTC TAACAAAGAC AACGACTATA CCGGTGTTAC CGATCTGCGC AGTGGGACGC TTTTGTTGAA TAACGATAAC GTGTTGGGTA ATACCCATGA ACTGCGTCTG GCGGCAGAGA CTGAACTGGA TATGAATGGT CACAGCCAGA CCGTGGGCAC GCTCAATGGC AGCGCCGATT CACTGCTGAG CTTAAATGGC GGCAGTCTGA CGGTTACCAA CGGGGGCACT TCAACCGGTT CGTTAACGGG GAGCGGAGAG CTGAATATTC AGGGCGGCAC GCTGGACATC GCGGGCGATA ACAGCAACCT GACGGCGAAT GTGAACATTG CTAATTCGGC TAATGTCCTG GTAAGTCATG CGCAGGGATT GGGTAGCGCA AACGTTGAGA ACAACGGTAC CCTGGCGTTG AATAATAGCG CTGAAAAAAG AGCGGCTGCG TCTGTGCATT ACACCCTGGG CGGCAATCTG ACCAACAACG GTACGCTGAT GACTGGAATG TCAGGACAGC AAGCTGGCAA TGTGTTAGTG GTGAAGGGGA ACTACCACGG TAATAACGGT CAACTAGTAA TGAATACGGT ACTGAATGGC GATGACTCAG TAACCGATAA ATTGGTTGTC GAGGGCGATA CTAGCGGCAC GACTGCCGTT ACGGTGAATA ACGCTGGCGG TACAGGTGCG AAAACCCTTA ACGGTATCGA ACTTATCCAT GTAGACGGTA AGTCTGAGGG CGAATTTGTT CAGGCTGGTC GTATCGTTGC GGGGGCGTAT GACTACACTC TCGCGCGTGG ACAAGGGGCA AATAGTGGTA ACTGGTATCT GACCAGCGGC AGTGATTCTC CTGAACTGCA GCCGGAGCCA GACCCGATGC CGAATCCGGA GCCAAACCCG AATCCAGAGC CGAACCCTAA CCCGACACCT ACGCCGGGTC CGGATCTGAA TGTGGATAAT GACCTGCGAC CGGAGGCGGG TAGCTACATT GCGAACCTTG CAGCAGCGAA TACAATGTTC ACCACGCGTC TGCATGAGCG TCTGGGTAAT ACGTACTATA CCGACATGGT GACGGGTGAG CAGAAACAAA CCACTATGTG GATGCGCCAT GAAGGTGGTC ATAATAAATG GCGTGATGGC AGCGGCCAGC TGAAAACCCA AAGCAATCGC TATGTTCTGC AACTGGGAGG CGATGTCGCG CAGTGGAGCC AAAACGGCAG CGACAGCTGG CATGTTGGGG TCATGGCGGG ATATGGCAAC AGCGACAGCA AAACCATTTC CTCGCGAACC GGTTATCGTG CAAAAGCGAG TGTGAACGGA TATAGCACCG GCCTCTATGC CACCTGGTAT GCCGATGACG AGTCGCGTAA TGGCGCGTAT CTCGACAGTT GGGCGCAGTA CAGCTGGTTT GATAACACAG TGAAAGGGGA TGACTTACAA AGTGAATCCT ATAAATCAAA AGGATTTACC GCTTCACTGG AAGCTGGATA CAAACACAAA TTAGCTGAAT TTAATGGCAG CCAGGGAACG CGTAATGAAT GGTATGTTCA GCCGCAAGCA CAGGTTACCT GGATGGGAGT CAAAGCCGAT AAGCACCGCG AAAGCAACGG AACCCTCGTT CATAGCAACG GTGATGGCAA TGTTCAAACC CGACTTGGCG TAAAAACCTG GCTGAAGAGC CACCATAAAA TGGATGACGG TAAATCCCGC GAGTTCCAGC CGTTTGTAGA AGTGAACTGG CTGCATAACA GTAAGGATTT CAGCACCAGT ATGGATGGCG TGTCCGTCAC TCAGGATGGA GCCCGAAATA TTGCTGAGAT AAAAACCGGG GTGGAAGGAC AGCTAAATGC CAACCTGAAT GTCTGGGGGA ATGTGGGCGT TCAGGTTGCC GATAGGGGAT ATAATGACAC CTCTGCAATG GTTGGCATTA AGTGGCAATT CTGA
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Protein sequence | MNKIYRLKWN RSRNCWSVCS ELGSRVKGKK SRAVLISAIS LYSSLVFADD VIVNQDKTID FGKENQSIDY RITVTDNANL VINTTDTSRP RLTLASGGGL DITGGKVTIN GPLNFLLKGT GFLNVSNAGS ELYADDLYES NSGMRHDQGY FNVSNGGKIH VKGTSRLTYT QGNVSGGGSQ VNAGTFFMGV YGGYGGNQFL SVNNGGEVNA REHISLGYYD QRSDTTLVVS DGGKISAPKI SLSTNSELAL GAQEGSAAKA AGIIDAEKIE FVWAKTSDKK ITLNHTDKNA TISADIVSGS EGLGYINALN GTTYLTGDNS AFSGKVKIEQ NGALGITQNI GTAEINNRGK LHLKADDSMT FANKISGNGT ISIDSGTVAL TGNNYAFSGY IDVASGAVAV ISEDKNIGRA DLDVDGKLQI NANKDWVFDN DLQGRGIVEI NMGNHEFSFD EFAYTDWFQG SLAFQNTTFN LEKNAEFLQR GGITAGQGSQ VTVGKGAHSI STLGFSGGTV DFGALTAGAQ MTEGTVNVSK TLDLRGEGVI QVSDSDVVSS VSRDIDSALS LTEVDDGNST IKLVDAQGAE VLGDAGNLQL QDKNGQILSS SAQRDIQQNG QKAAVGTYDY RLTSGVNNDG LYIGYGLTQL DLYATDSDAL VLSSNGKSEN AADLSAKITG SGDLAFSSQK GQTVSLSNKD NDYTGVTDLR SGTLLLNNDN VLGNTHELRL AAETELDMNG HSQTVGTLNG SADSLLSLNG GSLTVTNGGT STGSLTGSGE LNIQGGTLDI AGDNSNLTAN VNIANSANVL VSHAQGLGSA NVENNGTLAL NNSAEKRAAA SVHYTLGGNL TNNGTLMTGM SGQQAGNVLV VKGNYHGNNG QLVMNTVLNG DDSVTDKLVV EGDTSGTTAV TVNNAGGTGA KTLNGIELIH VDGKSEGEFV QAGRIVAGAY DYTLARGQGA NSGNWYLTSG SDSPELQPEP DPMPNPEPNP NPEPNPNPTP TPGPDLNVDN DLRPEAGSYI ANLAAANTMF TTRLHERLGN TYYTDMVTGE QKQTTMWMRH EGGHNKWRDG SGQLKTQSNR YVLQLGGDVA QWSQNGSDSW HVGVMAGYGN SDSKTISSRT GYRAKASVNG YSTGLYATWY ADDESRNGAY LDSWAQYSWF DNTVKGDDLQ SESYKSKGFT ASLEAGYKHK LAEFNGSQGT RNEWYVQPQA QVTWMGVKAD KHRESNGTLV HSNGDGNVQT RLGVKTWLKS HHKMDDGKSR EFQPFVEVNW LHNSKDFSTS MDGVSVTQDG ARNIAEIKTG VEGQLNANLN VWGNVGVQVA DRGYNDTSAM VGIKWQF
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