| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_0090 |
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| Symbol | murD |
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| ID | 5586940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 98777 |
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| End bp | 100093 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640923821 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001461258 |
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| Protein GI | 157156086 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0314248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATT ATCAGGGTAA AAATGTCGTC ATTATCGGCC TGGGCCTCAC CGGGCTTTCC
TGCGTGGACT TTTTCCTCGC TCGCGGTGTG ACGCCGCGCG TTATGGATAC GCGTATGACA
CCGCCTGGCC TGGATAAATT ACCCGAAGCC GTAGAACGCC ACACGGGCAG TCTGAATGAT
GAATGGCTGA TGGCGGCAGA TCTGATTGTC GCCAGTCCCG GTATTGCACT GGCGCATCCA
TCCTTAAGCG CTGCCGCTGA TGCCGGAATC GAAATCGTTG GCGATATCGA GCTGTTCTGT
CGCGAAGCAC AAGCACCGAT TGTGGCGATT ACCGGTTCTA ACGGCAAAAG CACGGTCACC
ACGCTAGTGG GTGAAATGGC GAAAGCGGCG GGGGTTAACG TTGGTGTGGG TGGCAATATT
GGCCTGCCAG CGTTGATGCT GCTTGATGCT GAGTGCGAAC TGTACGTGCT GGAACTGTCG
AGCTTCCAGC TGGAAACCAC TTCCAGCTTA CAGGCGGTGG CGGCGACCAT TCTGAACGTG
ACTGAAGATC ATATGGACCG CTATCCGTTT GGTTTGCAGC AATACCGTGC GGCAAAATTG
CGTATTTACG AAAATGCGAA AGTTTGTGTC GTCAATGCTG ATGATGCCTT AACAATGCCG
ATTCGCGGTG CTGATGAACG CTGCGTCAGC TTTGGCGTCA ACATGGGTGA CTATCACCTG
AATCATCAGC AGGGAGAAAC CTGGCTGCGA GTGAAAGGCG AGAAAGTGCT GAACGTGAAA
GAGATGAAAC TTTCCGGGCA GCATAACTAC ACCAATGCGC TGGCAGCACT GGCACTGGCA
GACGCAGCTG GTTTGCCGCG CGCCAGCAGC CTGAAAGCGT TAACCACCTT CGCCGGTCTG
CCGCATCGCT TTGAAGTGGT GCTGGAGCAC AATGGCGTAC GCTGGATTAA CGATTCGAAA
GCCACTAACG TCGGCAGTAC GGAAGCGGCG TTGAATGGCT TGCAGGTAGA CGGCACGCTG
CATTTGTTGC TGGGCGGCGA TGGTAAATCG GCGGACTTCA GTCCACTGGC GCGCTATCTG
AATGGCGACA ACGTGCGTTT GTACTGTTTT GGTCGTGACG GTGCGCAGCT GGCGGCGCTA
CGCCCGGAAG TGGCAGAACA AACCGAAACT ATGGAACAGG CGATGCGCTT GCTGGCTCCG
CGTGTTCAGC CGGGCGATAT GGTTCTGCTC TCCCCGGCCT GTGCCAGCCT TGATCAGTTC
AAGAACTTTG AACAACGAGG CAATGAGTTT GCCCGTCTGG CGAAGGAGTT AGGTTGA
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| Protein sequence | MADYQGKNVV IIGLGLTGLS CVDFFLARGV TPRVMDTRMT PPGLDKLPEA VERHTGSLND
EWLMAADLIV ASPGIALAHP SLSAAADAGI EIVGDIELFC REAQAPIVAI TGSNGKSTVT
TLVGEMAKAA GVNVGVGGNI GLPALMLLDA ECELYVLELS SFQLETTSSL QAVAATILNV
TEDHMDRYPF GLQQYRAAKL RIYENAKVCV VNADDALTMP IRGADERCVS FGVNMGDYHL
NHQQGETWLR VKGEKVLNVK EMKLSGQHNY TNALAALALA DAAGLPRASS LKALTTFAGL
PHRFEVVLEH NGVRWINDSK ATNVGSTEAA LNGLQVDGTL HLLLGGDGKS ADFSPLARYL
NGDNVRLYCF GRDGAQLAAL RPEVAEQTET MEQAMRLLAP RVQPGDMVLL SPACASLDQF
KNFEQRGNEF ARLAKELG
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