Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_0040 |
Symbol | caiB |
ID | 5590821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 41092 |
End bp | 42309 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640923771 |
Product | crotonobetainyl-CoA:carnitine CoA-transferase |
Protein accession | YP_001461208 |
Protein GI | 157156920 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCATC TACCCATGCC GAAATTCGGG CCGTTGGCCG GATTGCGCGT TGTCTTCTCC GGTATCGAAA TCGCCGGGCC GTTCGCCGGG CAAATGTTCG CAGAATGGGG TGCGGAAGTT ATCTGGATCG AGAACGTCGC CTGGGCCGAC ACCATTCGCG TTCAACCGAA CTACCCGCAG CTCTCCCGCC GCAATTTGCA CGCGCTGTCG TTAAATATTT TCAAAGATGA AGGCCGCGAA GCGTTTCTGA AATTAATGGA AACCACCGAT ATCTTCATCG AAGCCAGCAA AGGTCCGGCC TTTGCCCGTC GTGGCATTAC CGATGAAGTA CTGTGGCAGC ACAACCCGAA ACTGGTTATC GCTCACCTGT CCGGTTTTGG TCAGTACGGC ACCGAGGAGT ACACCAATCT TCCGGCCTAT AACACCATCG CCCAGGCCTT CAGTGGTTAC CTGATTCAGA ACGGTGATGT TGACCAGCCA ATGCCTGCCT TCCCGTATAC CGCCGATTAC TTTTCTGGCC TGACCGCCAC CACGGCGGCG CTGGCAGCAC TGCATAAAGC GCGTGAAACC GGTAAAGGCG AAAGTATCGA CATCGCCATG TATGAAGTGA TGCTGCGTAT GGGCCAGTAC TTCATGATGG ATTACTTCAA CGGCGGCGAA ATGTGCCCGC GCATGAGCAA AGGTAAAGAT CCCTACTACG CCGGTTGCGG TCTGTATAAA TGTGCCGACG GCTACATCGT GATGGAACTG GTGGGCATTA CCCAAATTGA AGAGTGCTTT AAAGATATTG GCCTCGCACA TCTACTCAGT ACGCCGGAAA TCCCGGAAGG CACTCAGCTT ATCCACCGTA TCGAATGCCC TTACGGCCCA CTGGTAGAAG AAAAACTCGA TGCCTGGCTG GCGGCACATA CCATCGCAGA AGTTAAAGAA CGCTTTGCCG AACTGAATAT CGCCTGTGCC AAAGTACTGA CCGTACCGGA ACTGGAAAGC AATCCACAGT ATGTTGCCCG TGAATCAATC ACTCAGTGGC AAACGATGGA TGGTCGCACC TGCAAAGGGC CGAACATCAT GCCGAAATTC AAAAATAACC CCGGACAAAT CTGGCGCGGA ATGCCCTCAC ATGGCATGGA CACGGCTGCC ATTTTGAAAA ATATCGGCTA CAGCGAAAAC GACATTCAGG AGTTGGTCAG CAAAGGTCTG GCCAAAGTTG AGGACTAA
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Protein sequence | MDHLPMPKFG PLAGLRVVFS GIEIAGPFAG QMFAEWGAEV IWIENVAWAD TIRVQPNYPQ LSRRNLHALS LNIFKDEGRE AFLKLMETTD IFIEASKGPA FARRGITDEV LWQHNPKLVI AHLSGFGQYG TEEYTNLPAY NTIAQAFSGY LIQNGDVDQP MPAFPYTADY FSGLTATTAA LAALHKARET GKGESIDIAM YEVMLRMGQY FMMDYFNGGE MCPRMSKGKD PYYAGCGLYK CADGYIVMEL VGITQIEECF KDIGLAHLLS TPEIPEGTQL IHRIECPYGP LVEEKLDAWL AAHTIAEVKE RFAELNIACA KVLTVPELES NPQYVARESI TQWQTMDGRT CKGPNIMPKF KNNPGQIWRG MPSHGMDTAA ILKNIGYSEN DIQELVSKGL AKVED
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