| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_4248 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 4613892 |
|---|
| End bp | 4615061 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 13 domain protein |
|---|
| Protein accession | ACX41846 |
|---|
| Protein GI | 260451424 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAA AAATTGCTGC TTTAACGCTG GCTATTGCCA GCGGTATTTC TGCTCAGTGG
GCCATAGCAG CGGATATGCC AGCCAGCCCG GCACCCACTA TCCCGGTGAA ACAGTATGTG
ACTCAGGTCA ATGCCGATAA CAGCGTGACC TTTCGCTACT TTGCCCCTGG GGCAAAAAAT
GTCTCTGTAG TGGTGGGTGT TCCGGTTCCG GACAATATTC ACCCGATGAC CAAAGACGAA
GCAGGAGTCT GGTCGTGGCG CACACCTATC CTGAAAGGCA ACCTGTACGA GTATTTTTTC
AATGTTGATG GTGTACGCAG CATTGATACA GGCACCGCAA TGACTAATCC TCAGCGCCAG
GTTAACTCCA GTATGATTCT GGTGCCAGGC AGTTATCTGG ATACGCGTTC TGTTGCGCAT
GGTGATTTGA TCGCCATAAC TTACCACTCC AACGCATTGC AATCTGAACG TCAGATGTAT
GTCTGGACCC CGCCAGGATA CACCGGCATG GGCGAGCCTT TGCCAGTGCT CTATTTCTAT
CACGGCTTTG GTGATACCGG ACGTTCCGCT ATCGATCAGG GGCGTATCCC GCAAATCATG
GATAACCTGC TTGCTGAAGG GAAAATTAAA CCGATGCTGG TGGTGATCCC GGATACAGAA
ACCGATGCGA AGGGCATTAT TCCCGAAGAT TTCGTGCCTC AGGAAAGACG TAAAGTCTTT
TATCCGCTGA ATGCTAAAGC GGCAGATCGC GAACTGATGA ACGATATTAT CCCGCTGATT
AGCAAGCGTT TTAATGTCCG TAAAGATGCC GATGGCCGCG CGCTGGCAGG GCTTTCACAA
GGCGGGTACC AGGCGCTGGT TTCCGGAATG AATCATCTGG AAAGCTTTGG CTGGCTGGCC
ACATTCAGTG GTGTTACCAC GACAACCGTA CCGGATGAAG GTGTCGCGGC CCGACTGAAC
GATCCGGCAG CTATCAACCA GCAACTACGT AATTTTACTG TGGTTGTGGG GGATAAAGAT
GTCGTAACCG GCAAGGATAT CGCCGGGCTG AAAACTGAGC TTGAGCAGAA AAAAATTAAC
TTTGATTACC AGGAATATCC GGGTCTGAAC CATGAAATGG ATGTCTGGCG ACCAGCCTAT
GCAGCCTTTG TACAGAAATT ATTTAAATAA
|
|---|
| Protein sequence | MNIKIAALTL AIASGISAQW AIAADMPASP APTIPVKQYV TQVNADNSVT FRYFAPGAKN
VSVVVGVPVP DNIHPMTKDE AGVWSWRTPI LKGNLYEYFF NVDGVRSIDT GTAMTNPQRQ
VNSSMILVPG SYLDTRSVAH GDLIAITYHS NALQSERQMY VWTPPGYTGM GEPLPVLYFY
HGFGDTGRSA IDQGRIPQIM DNLLAEGKIK PMLVVIPDTE TDAKGIIPED FVPQERRKVF
YPLNAKAADR ELMNDIIPLI SKRFNVRKDA DGRALAGLSQ GGYQALVSGM NHLESFGWLA
TFSGVTTTTV PDEGVAARLN DPAAINQQLR NFTVVVGDKD VVTGKDIAGL KTELEQKKIN
FDYQEYPGLN HEMDVWRPAY AAFVQKLFK
|
|---|
| |