Gene EcDH1_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4240 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4604071 
End bp4605030 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content55% 
IMG OID 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionACX41838 
Protein GI260451416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCAA CCAAGCCTGC TTTTAACCCA CCGGGTAAAA AGGGCGACAT AATTTTCAGC 
GTGCTGGTAA AACTGGCGGC GCTGATTGTG CTATTGATGT TGGGTGGCAT TATTGTCTCT
CTGATCATCT CCTCCTGGCC GAGCATTCAG AAATTTGGTC TGGCTTTCCT ATGGACCAAA
GAGTGGGATG CACCGAACGA TATCTACGGG GCGCTGGTGC CGATCTACGG TACGTTGGTG
ACTTCGTTTA TCGCGCTGCT GATCGCCGTC CCGGTGAGTT TCGGTATCGC CCTGTTCCTG
ACTGAGCTTG CGCCTGGCTG GCTGAAACGC CCGCTGGGTA TCGCCATTGA GCTGCTGGCA
GCCATTCCAA GTATCGTTTA CGGCATGTGG GGCCTGTTTA TCTTTGCGCC GCTGTTCGCC
GTTTACTTTC AGGAGCCGGT CGGCAATATC ATGTCGAATA TCCCGATTGT TGGCGCGCTG
TTCTCTGGCC CCGCATTTGG TATCGGTATC CTCGCGGCAG GCGTGATCCT CGCCATCATG
ATTATTCCGT ACATTGCGGC GGTAATGCGT GATGTGTTCG AACAAACCCC GGTGATGATG
AAAGAGTCGG CCTACGGTAT TGGCTGCACC ACCTGGGAAG TTATCTGGCG TATCGTTCTT
CCGTTCACCA AAAATGGTGT TATCGGCGGC ATCATGCTGG GGCTGGGCCG CGCGCTCGGT
GAAACCATGG CGGTGACCTT TATCATCGGT AACACCTACC AGCTCGACAG CGCCTCGCTG
TATATGCCGG GCAACAGTAT CACCTCTGCG CTGGCGAACG AATTTGCGGA AGCGGAATCC
GGTCTGCACG TTGCCGCACT GATGGAACTG GGCCTGATCC TGTTTGTGAT TACCTTCATC
GTCCTCGCCG CATCGAAGTT TATGATTATG CGCCTGGCTA AGAATGAGGG GGCACGCTAA
 
Protein sequence
MAATKPAFNP PGKKGDIIFS VLVKLAALIV LLMLGGIIVS LIISSWPSIQ KFGLAFLWTK 
EWDAPNDIYG ALVPIYGTLV TSFIALLIAV PVSFGIALFL TELAPGWLKR PLGIAIELLA
AIPSIVYGMW GLFIFAPLFA VYFQEPVGNI MSNIPIVGAL FSGPAFGIGI LAAGVILAIM
IIPYIAAVMR DVFEQTPVMM KESAYGIGCT TWEVIWRIVL PFTKNGVIGG IMLGLGRALG
ETMAVTFIIG NTYQLDSASL YMPGNSITSA LANEFAEAES GLHVAALMEL GLILFVITFI
VLAASKFMIM RLAKNEGAR