Gene EcDH1_4189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4189 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4541948 
End bp4543210 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content54% 
IMG OID 
Productnucleotide sugar dehydrogenase 
Protein accessionACX41789 
Protein GI260451367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTG CGACCATTTC TGTTATCGGA CTGGGTTATA TCGGGCTGCC AACGGCAGCA 
GCGTTTGCCT CACGGCAAAA ACAGGTAATT GGTGTCGATA TCAACCAACA TGCGGTTGAT
ACCATCAATC GTGGCGAAAT CCATATCGTC GAACCTGATT TGGCGAGTGT AGTAAAAACT
GCCGTAGAAG GCGGTTTTTT ACGAGCGAGC ACGACGCCAG TTGAAGCGGA TGCCTGGCTG
ATTGCTGTAC CCACGCCGTT TAAGGGCGAT CATGAGCCAG ATATGACCTA CGTTGAATCG
GCTGCTCGCT CCATTGCGCC AGTGCTGAAA AAAGGCGCGC TGGTGATCCT TGAATCCACC
TCGCCGGTGG GGTCAACCGA GAAGATGGCA GAATGGTTAG CAGAGATGCG TCCGGATCTC
ACTTTCCCGC AGCAGGTGGG CGAGCAGGCG GACGTCAACA TTGCTTACTG CCCGGAACGC
GTGTTACCAG GACAGGTAAT GGTCGAGCTG ATTAAAAACG ATCGCGTGAT TGGTGGTATG
ACGCCGGTTT GTTCGGCCCG CGCCAGCGAA CTGTACAAAA TTTTCCTCGA AGGTGAGTGT
GTCGTCACTA ACTCGCGGAC GGCGGAAATG TGTAAGCTCA CCGAAAACAG CTTCCGCGAT
GTGAATATCG CTTTTGCTAA TGAATTGTCG CTGATTTGTG CCGATCAGGG GATTAACGTC
TGGGAACTGA TTCGCCTGGC GAATCGTCAC CCTCGCGTTA ATATTCTTCA GCCTGGCCCT
GGCGTGGGCG GTCACTGCAT TGCTGTTGAT CCGTGGTTTA TCGTGGCACA GAACCCCCAG
CAGGCGCGGC TTATCCGTAC CGCGCGCGAA GTGAACGATC ACAAACCGTT CTGGGTTATC
GATCAGGTGA AAGCGGCGGT GGCTGATTGC CTGGCGGCTA CCGATAAACG CGCCAGTGAA
CTGAAAATCG CCTGCTTTGG TCTGGCGTTT AAACCGAATA TTGATGACCT GCGCGAAAGC
CCGGCGATGG AAATCGCTGA ACTGATCGCC CAGTGGCATA GCGGCGAAAC TCTGGTTGTT
GAGCCTAACA TCCACCAGTT GCCGAAAAAA CTGACCGGGC TTTGTACTCT GGCGCAGCTT
GACGAGGCGC TGGCAACGGC AGACGTGCTG GTGATGCTGG TCGATCATAG TCAGTTCAAA
GTTATCAATG GCGACAATGT CCATCAGCAG TATGTCGTCG ATGCCAAAGG AGTCTGGCGC
TGA
 
Protein sequence
MSFATISVIG LGYIGLPTAA AFASRQKQVI GVDINQHAVD TINRGEIHIV EPDLASVVKT 
AVEGGFLRAS TTPVEADAWL IAVPTPFKGD HEPDMTYVES AARSIAPVLK KGALVILEST
SPVGSTEKMA EWLAEMRPDL TFPQQVGEQA DVNIAYCPER VLPGQVMVEL IKNDRVIGGM
TPVCSARASE LYKIFLEGEC VVTNSRTAEM CKLTENSFRD VNIAFANELS LICADQGINV
WELIRLANRH PRVNILQPGP GVGGHCIAVD PWFIVAQNPQ QARLIRTARE VNDHKPFWVI
DQVKAAVADC LAATDKRASE LKIACFGLAF KPNIDDLRES PAMEIAELIA QWHSGETLVV
EPNIHQLPKK LTGLCTLAQL DEALATADVL VMLVDHSQFK VINGDNVHQQ YVVDAKGVWR