Gene EcDH1_4110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4110 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4448704 
End bp4450107 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content45% 
IMG OID 
Productsugar (Glycoside-Pentoside-Hexuronide) transporter 
Protein accessionACX41710 
Protein GI260451288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACC ATAATCCACT GACATTAAAA CTGAATCTGC GGGAAAAAAT CGCCTATGGT 
ATGGGCGACG TCGGTTCGAA TTTAATGCTC TGCATCGGTA CTCTGTATCT CCTCAAATTT
TATACCGATG AATTAGGGAT GCCTGCTTAC TATGGCGGGA TTATCTTTCT GGTGGCGAAG
TTTTTTACCG CGTTTACCGA TATGCTCACC GGATTTTTAC TCGACTCGCG GAAAAATATT
GGGCCTAAAG GCAAATTTCG TCCCTTTATT TTATATGCAG CGGTTCCGGC GGCGTTAATT
GCAACGCTCC AGTTTATCGC CACCACCTTT TGTTTGCCGG TTAAAACGAC GATTGCCACC
GCGCTGTTTA TGATGTTTGG ACTTTCATAC AGTCTGATGA ACTGCTCGTA TGGTGCGATG
ATCCCGGCAA TTACCAAAAA CCCGAATGAG CGCGCGCAGC TCGCGGCTTA CCGCCAGGGT
GGTGCAACCA TAGGGCTATT GATTTGTACC GTGGCGTTTA TTCCGTTGCA GTCGCTTTTT
TCTGACTCAA CCGTCGGTTA TGCCTGTGCG GCACTTATGT TCTCCATTGG CGGCTTTATT
TTTATGATGC TGTGCTACAG AGGCGTCAAA GAGCATTATG TGGACACAAC GCCAACCGGA
CATAAAGCCA GTATTCTCAA ATCATTTTGC GCGATATTTC GGAATCCGCC ATTGCTGGTT
TTATGCATTG CTAACTTGTG TACCCTGGCG GCATTTAATA TCAAACTGGC GATTCAGGTC
TATTACACCC AGTATGTGCT GAATGATATT AATTTATTGT CGTGGATGGG ATTCTTCAGT
ATGGGATGCA TCCTCATCGG CGTATTACTG GTGCCATTAA CTGTAAAATG TTTTGGTAAA
AAACAGGTTT ATCTGGCTGG CATGGTGCTG TGGGCGGTGG GTGATATACT GAATTATTTC
TGGGGAAGTA ACTCTTTCAC TTTCGTCATG TTCTCTTGTG TCGCCTTTTT TGGCACGGCC
TTTGTAAACA GCCTGAACTG GGCACTGGTA CCAGATACCG TAGATTACGG TGAATGGAAA
ACCGGTATTC GTGCCGAAGG TTCTGTTTAT ACCGGTTATA CCTTCTTTCG TAAAATTTCT
GCCGCACTTG CTGGCTTCTT GCCAGGCATT ATGCTGACGC AAATTGGTTA TGTTCCCAAC
ATCGCGCAAA GCGATGCGAC ATTACAGGGT TTGCGTCAGC TCATTTTTAT CTGGCCTTGT
GCACTGGCAA TTATTGCTGC ATTGACGATG GGATTCTTTT ACACACTCAA TGAAAAACGG
TTTGCATTGA TTATTGAGGA AATCAACCAA CGCAAAAATA AAGAGATGGC GACAGAAGAA
AAAACGGCTT CCGTAACGTT ATAA
 
Protein sequence
MSDHNPLTLK LNLREKIAYG MGDVGSNLML CIGTLYLLKF YTDELGMPAY YGGIIFLVAK 
FFTAFTDMLT GFLLDSRKNI GPKGKFRPFI LYAAVPAALI ATLQFIATTF CLPVKTTIAT
ALFMMFGLSY SLMNCSYGAM IPAITKNPNE RAQLAAYRQG GATIGLLICT VAFIPLQSLF
SDSTVGYACA ALMFSIGGFI FMMLCYRGVK EHYVDTTPTG HKASILKSFC AIFRNPPLLV
LCIANLCTLA AFNIKLAIQV YYTQYVLNDI NLLSWMGFFS MGCILIGVLL VPLTVKCFGK
KQVYLAGMVL WAVGDILNYF WGSNSFTFVM FSCVAFFGTA FVNSLNWALV PDTVDYGEWK
TGIRAEGSVY TGYTFFRKIS AALAGFLPGI MLTQIGYVPN IAQSDATLQG LRQLIFIWPC
ALAIIAALTM GFFYTLNEKR FALIIEEINQ RKNKEMATEE KTASVTL