Gene EcDH1_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_4084 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4421647 
End bp4422093 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content50% 
IMG OID 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionACX41684 
Protein GI260451262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCTC TTACTGCAAG CTGTATTGAC CTGAATATTC AGGGCAATGG CGCTTATTCC 
GTTCTGAAGC AGTTGGCGAC AATAGCGTTA CAAAACGGTT TTATCACCGA CTCACACCAG
TTCCTGCAAA CCCTGCTGCT GCGCGAAAAA ATGCACTCTA CTGGATTTGG TTCCGGTGTC
GCCGTGCCGC ACGGTAAAAG CGCCTGCGTT AAACAACCGT TCGTATTATT CGCCCGCAAA
GCGCAGGCTA TTGACTGGAA AGCCAGCGAT GGCGAAGACG TCAATTGCTG GATCTGCCTC
GGCGTGCCGC AAAGCGGCGA AGAGGATCAG GTCAAAATCA TCGGCACACT GTGTCGCAAA
ATTATTCACA AGGAATTTAT TCATCAACTG CAACAGGGCG ATACCGACCA GGTGCTTGCC
TTGTTAAATC AAACCCTCAG CTCATAA
 
Protein sequence
MAALTASCID LNIQGNGAYS VLKQLATIAL QNGFITDSHQ FLQTLLLREK MHSTGFGSGV 
AVPHGKSACV KQPFVLFARK AQAIDWKASD GEDVNCWICL GVPQSGEEDQ VKIIGTLCRK
IIHKEFIHQL QQGDTDQVLA LLNQTLSS