| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3990 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 4311147 |
|---|
| End bp | 4312544 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | ACX41590 |
|---|
| Protein GI | 260451168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTA TGCAACGTTC TAAAGACTCC TTAGCTAAAT GGTTAAGCGC GATCCTCCCC
GTGGTCATTG TTGGGCTGGT GGGATTGTTT GCGGTAACTG TGATTCGTGA TTATGGGCGG
GCAAGCGAGG CAGACCGCCA GGCATTACTG GAAAAAGGTA ATGTGCTTAT CCGCGCTCTG
GAGTCGGGAA GCCGCGTAGG GATGGGGATG CGAATGCACC ATGTACAGCA ACAGGCGCTT
CTGGAAGAGA TGGCGGGACA GCCGGGAGTG TTGTGGTTCG CAGTCACCGA TGCGCAGGGC
ATCATTATTC TTCATAGCGA CCCCGATAAG GTCGGGCGTG CGCTCTATTC GCCGGATGAA
ATGCAGAAAT TAAAGCCAGA GGAAAACTCC CGCTGGCGGC TGCTTGGGAA AACGGAAACT
ACGCCTGCAC TTGAGGTCTA TCGTTTGTTC CAGCCAATGT CAGCGCCCTG GCGGCATGGA
ATGCACAATA TGCCGCGCTG TAACGGCAAA GCTGTGCCAC AAGTAGATGC ACAACAGGCT
ATTTTTATCG CCGTTGATGC CAGTGATCTG GTTGCAACCC AGAGTGGGGA AAAGCGCAAT
ACCCTGATTA TCCTCTTCGC CCTGGCGACG GTCTTGCTGG CAAGCGTATT GTCATTCTTC
TGGTATCGCC GCTATCTGCG CTCGCGCCAG CTTCTACAAG ATGAAATGAA GCGCAAAGAG
AAGCTGGTGG CGCTGGGGCA TCTTGCGGCA GGCGTTGCCC ACGAAATCCG TAACCCACTT
TCCTCGATTA AAGGACTGGC GAAATACTTT GCCGAGCGCG CGCCTGCAGG GGGAGAAGCG
CATCAACTGG CGCAGGTGAT GGCGAAAGAG GCCGACCGTT TAAACCGCGT GGTAAGCGAG
TTGCTGGAAC TGGTTAAGCC AACGCATCTG GCTTTGCAGG CGGTGGATCT CAACACGCTG
ATTAACCACT CATTACAGCT GGTAAGTCAG GATGCAAACA GCCGGGAGAT CCAGTTACGC
TTTACCGCCA ACGACACATT ACCGGAAATT CAGGCCGACC CGGACAGGCT GACTCAGGTC
CTGTTGAATC TCTATCTCAA TGCTATTCAG GCGATTGGTC AGCATGGCGT GATTAGCGTG
ACGGCCAGCG AAAGCGGCGC GGGCGTGAAA ATCAGCGTTA CCGACAGCGG TAAGGGAATT
GCGGCAGATC AGCTTGATGC CATCTTCACT CCGTACTTCA CCACTAAAGC CGAAGGCACC
GGATTGGGGC TGGCGGTCGT GCATAATATT GTTGAACAAC ACGGTGGTAC AATTCAGGTC
GCAAGCCAGG AGGGAAAAGG CTCAACGTTC ACCCTCTGGC TTCCGGTCAA TATTACGCGT
AAGGACCCAC AAGGATGA
|
|---|
| Protein sequence | MRFMQRSKDS LAKWLSAILP VVIVGLVGLF AVTVIRDYGR ASEADRQALL EKGNVLIRAL
ESGSRVGMGM RMHHVQQQAL LEEMAGQPGV LWFAVTDAQG IIILHSDPDK VGRALYSPDE
MQKLKPEENS RWRLLGKTET TPALEVYRLF QPMSAPWRHG MHNMPRCNGK AVPQVDAQQA
IFIAVDASDL VATQSGEKRN TLIILFALAT VLLASVLSFF WYRRYLRSRQ LLQDEMKRKE
KLVALGHLAA GVAHEIRNPL SSIKGLAKYF AERAPAGGEA HQLAQVMAKE ADRLNRVVSE
LLELVKPTHL ALQAVDLNTL INHSLQLVSQ DANSREIQLR FTANDTLPEI QADPDRLTQV
LLNLYLNAIQ AIGQHGVISV TASESGAGVK ISVTDSGKGI AADQLDAIFT PYFTTKAEGT
GLGLAVVHNI VEQHGGTIQV ASQEGKGSTF TLWLPVNITR KDPQG
|
|---|
| |