Gene EcDH1_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3984 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4299261 
End bp4300190 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content50% 
IMG OID 
ProductHomoserine O-succinyltransferase 
Protein accessionACX41584 
Protein GI260451162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATTC GTGTGCCGGA CGAGCTACCC GCCGTCAATT TCTTGCGTGA AGAAAACGTC 
TTTGTGATGA CAACTTCTCG TGCGTCTGGT CAGGAAATTC GTCCACTTAA GGTTCTGATC
CTTAACCTGA TGCCGAAGAA GATTGAAACT GAAAATCAGT TTCTGCGCCT GCTTTCAAAC
TCACCTTTGC AGGTCGATAT TCAGCTGTTG CGCATCGATT CCCGTGAATC GCGCAACACG
CCCGCAGAGC ATCTGAACAA CTTCTACTGT AACTTTGAAG ATATTCAGGA TCAGAACTTT
GACGGTTTGA TTGTAACTGG TGCGCCGCTG GGCCTGGTGG AGTTTAATGA TGTCGCTTAC
TGGCCGCAGA TCAAACAGGT GCTGGAGTGG TCGAAAGATC ACGTCACCTC GACGCTGTTT
GTCTGCTGGG CGGTACAGGC CGCGCTCAAT ATCCTCTACG GCATTCCTAA GCAAACTCGC
ACCGAAAAAC TCTCTGGCGT TTACGAGCAT CATATTCTCC ATCCTCATGC GCTTCTGACG
CGTGGCTTTG ATGATTCATT CCTGGCACCG CATTCGCGCT ATGCTGACTT TCCGGCAGCG
TTGATTCGTG ATTACACCGA TCTGGAAATT CTGGCAGAGA CGGAAGAAGG GGATGCATAT
CTGTTTGCCA GTAAAGATAA GCGCATTGCC TTTGTGACGG GCCATCCCGA ATATGATGCG
CAAACGCTGG CGCAGGAATT TTTCCGCGAT GTGGAAGCCG GACTAGACCC GGATGTACCG
TATAACTATT TCCCGCACAA TGATCCGCAA AATACACCGC GAGCGAGCTG GCGTAGTCAC
GGTAATTTAC TGTTTACCAA CTGGCTCAAC TATTACGTCT ACCAGATCAC GCCATACGAT
CTACGGCACA TGAATCCAAC GCTGGATTAA
 
Protein sequence
MPIRVPDELP AVNFLREENV FVMTTSRASG QEIRPLKVLI LNLMPKKIET ENQFLRLLSN 
SPLQVDIQLL RIDSRESRNT PAEHLNNFYC NFEDIQDQNF DGLIVTGAPL GLVEFNDVAY
WPQIKQVLEW SKDHVTSTLF VCWAVQAALN ILYGIPKQTR TEKLSGVYEH HILHPHALLT
RGFDDSFLAP HSRYADFPAA LIRDYTDLEI LAETEEGDAY LFASKDKRIA FVTGHPEYDA
QTLAQEFFRD VEAGLDPDVP YNYFPHNDPQ NTPRASWRSH GNLLFTNWLN YYVYQITPYD
LRHMNPTLD