Gene EcDH1_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3953 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4260582 
End bp4261454 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content52% 
IMG OID 
Product4-hydroxybenzoate polyprenyl transferase 
Protein accessionACX41553 
Protein GI260451131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTGGA GTCTGACGCA GAATAAGCTG CTGGCGTTTC ATCGCTTAAT GCGTACGGAT 
AAGCCAATTG GCGCGTTACT GCTGCTCTGG CCAACATTAT GGGCGTTGTG GGTGGCGACA
CCGGGCGTTC CCCAGCTCTG GATCCTGGCG GTGTTTGTCG CGGGTGTCTG GCTGATGCGC
GCTGCCGGAT GTGTGGTGAA TGATTATGCT GACCGCAAGT TTGATGGTCA TGTTAAGCGC
ACGGCGAACC GACCACTTCC CAGCGGCGCG GTAACAGAGA AAGAGGCGCG CGCGCTGTTT
GTCGTGCTGG TACTGATTTC GTTTTTACTG GTGCTGACGC TGAATACGAT GACCATTCTG
TTGTCGATTG CCGCGCTAGC GCTGGCGTGG GTGTACCCGT TTATGAAGCG GTATACCCAT
CTACCGCAAG TGGTGCTGGG CGCGGCGTTT GGCTGGTCGA TTCCAATGGC TTTTGCCGCT
GTGAGTGAGT CGGTGCCATT GAGTTGCTGG TTAATGTTCC TCGCCAATAT TCTCTGGGCG
GTGGCTTACG ACACGCAGTA TGCGATGGTT GACCGCGATG ATGATGTGAA GATTGGCATT
AAATCCACGG CAATCCTGTT CGGCCAATAC GATAAATTGA TTATTGGTAT TTTGCAGATT
GGCGTACTGG CACTGATGGC GATCATCGGT GAGTTAAATG GCTTAGGCTG GGGATATTAC
TGGTCAATTC TGGTGGCTGG CGCGCTGTTT GTTTATCAAC AAAAACTGAT TGCCAACCGC
GAGCGTGAAG CCTGCTTTAA AGCATTTATG AATAATAACT ATGTTGGTCT GGTACTATTT
TTAGGGCTGG CAATGAGTTA CTGGCATTTC TGA
 
Protein sequence
MEWSLTQNKL LAFHRLMRTD KPIGALLLLW PTLWALWVAT PGVPQLWILA VFVAGVWLMR 
AAGCVVNDYA DRKFDGHVKR TANRPLPSGA VTEKEARALF VVLVLISFLL VLTLNTMTIL
LSIAALALAW VYPFMKRYTH LPQVVLGAAF GWSIPMAFAA VSESVPLSCW LMFLANILWA
VAYDTQYAMV DRDDDVKIGI KSTAILFGQY DKLIIGILQI GVLALMAIIG ELNGLGWGYY
WSILVAGALF VYQQKLIANR EREACFKAFM NNNYVGLVLF LGLAMSYWHF