| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3878 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 4178961 |
|---|
| End bp | 4180634 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | sulfatase |
|---|
| Protein accession | ACX41479 |
|---|
| Protein GI | 260451057 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACTT TGTTCGATGG AAACACCGTG ATGTTGAAGC GCCTACTAAA AAGACCCTCT
TTGAATTTAC TCGCCTGGCT ATTGTTGGCC GCTTTTTATA TCTCTATCTG CCTGAATATT
GCCTTTTTTA AACAGGTGTT GCAGGCGCTG CCGCTGGATT CGCTGCATAA CGTACTGGTT
TTCTTGTCGA TGCCGGTCGT CGCTTTCAGC GTGATTAATA TTGTCCTGAC ACTAAGCTCT
TTCTTATGGC TTAATCGACC ACTGGCCTGC CTGTTTATTC TGGTTGGCGC GGCTGCACAA
TATTTCATAA TGACTTACGG CATCGTCATC GACCGCTCGA TGATTGCCAA TATTATTGAT
ACCACTCCGG CAGAAAGTTA TGCGCTGATG ACACCGCAAA TGTTATTAAC GCTGGGATTC
AGCGGCGTGC TTGCTGCGCT GATTGCCTGC TGGATAAAAA TCAAACCTGC CACCTCGCGT
CTGCGCAGTG TTCTTTTCCG TGGAGCCAAT ATTCTGGTTT CTGTACTACT GATTTTGCTG
GTCGCCGCAC TGTTTTATAA AGACTACGCC TCGTTGTTCC GCAATAACAA AGAGCTGGTG
AAATCCTTAA GCCCCTCTAA CAGCATTGTT GCCAGCTGGT CATGGTACTC CCATCAGCGA
CTGGCAAATC TGCCGCTGGT GCGAATTGGT GAAGACGCGC ACCGCAACCC GTTAATGCAG
AACGAAAAAC GTAAAAATTT GACCATCCTG ATTGTCGGCG AAACCTCGCG GGCGGAGAAC
TTCTCCCTCA ACGGCTACCC GCGTGAAACT AACCCGCGGC TGGCGAAAGA TAACGTGGTC
TATTTCCCTA ATACCGCATC TTGCGGCACG GCAACGGCAG TTTCAGTACC GTGCATGTTC
TCGGATATGC CGCGTGAGCA CTACAAAGAA GAGCTGGCAC AGCACCAGGA AGGCGTGCTG
GATATCATTC AGCGAGCGGG CATCAACGTG CTGTGGAATG ACAACGATGG CGGCTGTAAA
GGTGCCTGCG ACCGCGTGCC TCACCAGAAC GTCACCGCGC TGAATCTACC TGATCAGTGC
ATCAACGGCG AATGCTATGA CGAAGTGCTG TTCCACGGGC TTGAAGAGTA CATCAATAAC
CTGCAAGGTG ATGGCGTGAT TGTCTTACAC ACCATCGGCA GCCACGGTCC GACCTATTAC
AACCGCTATC CGCCTCAGTT CAGGAAATTT ACCCCAACCT GCGACACCAA TGAGATCCAG
ACCTGTACCA AAGAGCAACT GGTGAACACT TACGACAACA CGCTGGTTTA CGTCGACTAT
ATTGTTGATA AAGCGATTAA TCTGCTGAAA GAACATCAGG ATAAATTTAC CACCAGCCTG
GTTTATCTTT CTGACCACGG TGAATCGTTA GGTGAAAATG GCATCTATCT GCACGGTCTG
CCTTATGCCA TCGCCCCGGA TAGCCAAAAA CAGGTGCCGA TGCTGCTGTG GCTGTCGGAG
GATTATCAAA AACGGTATCA GGTTGACCAG AACTGCCTGC AAAAACAGGC GCAAACGCAA
CACTATTCAC AAGACAATTT ATTCTCCACG CTATTGGGAT TAACTGGCGT TGAGACGAAG
TATTACCAGG CTGCGGATGA TATTCTGCAA ACTTGCAGGA GAGTGAGTGA ATGA
|
|---|
| Protein sequence | MRTLFDGNTV MLKRLLKRPS LNLLAWLLLA AFYISICLNI AFFKQVLQAL PLDSLHNVLV
FLSMPVVAFS VINIVLTLSS FLWLNRPLAC LFILVGAAAQ YFIMTYGIVI DRSMIANIID
TTPAESYALM TPQMLLTLGF SGVLAALIAC WIKIKPATSR LRSVLFRGAN ILVSVLLILL
VAALFYKDYA SLFRNNKELV KSLSPSNSIV ASWSWYSHQR LANLPLVRIG EDAHRNPLMQ
NEKRKNLTIL IVGETSRAEN FSLNGYPRET NPRLAKDNVV YFPNTASCGT ATAVSVPCMF
SDMPREHYKE ELAQHQEGVL DIIQRAGINV LWNDNDGGCK GACDRVPHQN VTALNLPDQC
INGECYDEVL FHGLEEYINN LQGDGVIVLH TIGSHGPTYY NRYPPQFRKF TPTCDTNEIQ
TCTKEQLVNT YDNTLVYVDY IVDKAINLLK EHQDKFTTSL VYLSDHGESL GENGIYLHGL
PYAIAPDSQK QVPMLLWLSE DYQKRYQVDQ NCLQKQAQTQ HYSQDNLFST LLGLTGVETK
YYQAADDILQ TCRRVSE
|
|---|
| |