Gene EcDH1_3822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3822 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp4114379 
End bp4115329 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content53% 
IMG OID 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionACX41424 
Protein GI260451002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000554212 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA TCAGTAAGGC GAGCCTGCCT AAGGCGATTT TTTTGATGGG GCCGACGGCC 
TCCGGTAAAA CGGCGTTAGC CATTGAGCTG CGTAAAATTT TACCAGTAGA GTTGATAAGC
GTTGATTCTG CCCTTATTTA CAAAGGGATG GATATCGGGA CGGCGAAGCC GAACGCTGAA
GAGTTACTCG CCGCGCCGCA CCGATTGCTG GATATTCGCG ATCCGTCGCA GGCTTACTCG
GCTGCTGATT TTCGCCGCGA TGCGCTGGCG GAAATGGCCG ATATCACCGC GGCGGGGCGG
ATCCCACTGT TAGTGGGCGG TACGATGTTG TATTTCAAGG CATTGCTGGA AGGGTTGTCG
CCGCTACCGT CGGCAGACCC GGAAGTACGG GCCAGAATTG AGCAACAGGC GGCAGAGCAA
GGTTGGGAGT CATTGCATCG TCAACTTCAG GAGGTAGATC CGGTTGCGGC AGCAAGGATT
CATCCAAATG ATCCACAAAG GCTTTCCCGG GCACTGGAAG TTTTTTTCAT TTCGGGTAAA
ACTTTAACGG AACTGACGCA AACGTCAGGA GACGCTCTAC CGTATCAGGT GCATCAGTTC
GCCATCGCCC CGGCGAGCCG TGAACTGCTC CATCAACGCA TTGAGCAGCG TTTTCATCAG
ATGTTGGCTT CAGGTTTTGA AGCAGAAGTC CGGGCGCTTT TTGCCCGAGG AGATTTGCAT
ACGGACTTGC CTTCCATTCG TTGCGTGGGT TATCGCCAGA TGTGGTCTTA CCTTGAAGGC
GAAATCTCAT ACGATGAAAT GGTTTATCGA GGTGTTTGCG CCACGAGACA GTTGGCGAAG
CGGCAGATAA CCTGGCTGCG TGGTTGGGAA GGGGTTCACT GGCTTGACAG TGAAAAACCA
GAACAGGCGC GTGACGAAGT ATTACAGGTT GTTGGTGCTA TCGCAGGCTG A
 
Protein sequence
MSDISKASLP KAIFLMGPTA SGKTALAIEL RKILPVELIS VDSALIYKGM DIGTAKPNAE 
ELLAAPHRLL DIRDPSQAYS AADFRRDALA EMADITAAGR IPLLVGGTML YFKALLEGLS
PLPSADPEVR ARIEQQAAEQ GWESLHRQLQ EVDPVAAARI HPNDPQRLSR ALEVFFISGK
TLTELTQTSG DALPYQVHQF AIAPASRELL HQRIEQRFHQ MLASGFEAEV RALFARGDLH
TDLPSIRCVG YRQMWSYLEG EISYDEMVYR GVCATRQLAK RQITWLRGWE GVHWLDSEKP
EQARDEVLQV VGAIAG