Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3631 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 3908192 |
End bp | 3908869 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | ACX41244 |
Protein GI | 260450822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00452114 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACACA GCCGAATTAA GAAGAGAAAT GTCGCACTCA TAGAAAAATG CGTCATGAGT AGTATCGGTA TTGAGAGTTT ATTCAGAAAG TTTGCGGGTA ACCCTTATAA GCTCCATACC TATACCAGTC AGGAGTCATT TCAGGATGCC ATGTCGCGGA TCTCGTTTGC GGCGGTCATT TTTTCTTTTT CTGCCATGAG AAGTGAGCGC AGAGAGGGAT TATCTTGCCT GACTGAACTG GCGATTAAGT TTCCGCGTAC CCGGCGTTTA GTTATTGCGG ATGATGATAT TGAAGCTCGG CTGATTGGTT CATTGTCGCC ATCACCGCTG GACGGTGTAT TAAGTAAAGC GTCAACGTTG GAGATTTTTC ATCAGGAACT CTTTTTGTCA TTAAATGGTG TACGTCAGGC GACCGACCGA CTGAACAATC AGTGGTACAT TAACCAAAGC CGGACGTTAA GCCCGACGGA GAGAGAAATA TTGCGCTTTA TGTCGCGTGG CTACTCAATG ACACAAATTG CCGAGCAGCT TAAACGCAAT ATCAAAACGA TCCGTGCACA TAAATTTAAT GTGATGTCGA AACTGGGCGT CAGTTCTGAC GCAGGGTTGT TGGAGGCCGC AGATATTCTG TTATGTATGC GGCATTGCGA AACAAGTAAT GTGTTGCATC CCTATTAA
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Protein sequence | MEHSRIKKRN VALIEKCVMS SIGIESLFRK FAGNPYKLHT YTSQESFQDA MSRISFAAVI FSFSAMRSER REGLSCLTEL AIKFPRTRRL VIADDDIEAR LIGSLSPSPL DGVLSKASTL EIFHQELFLS LNGVRQATDR LNNQWYINQS RTLSPTEREI LRFMSRGYSM TQIAEQLKRN IKTIRAHKFN VMSKLGVSSD AGLLEAADIL LCMRHCETSN VLHPY
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