Gene EcDH1_3524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3524 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3787848 
End bp3789419 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content53% 
IMG OID 
Product2-isopropylmalate synthase 
Protein accessionACX41139 
Protein GI260450717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGC AAGTCATTAT TTTCGATACC ACATTGCGCG ACGGTGAACA GGCGTTACAG 
GCAAGCTTGA GTGTGAAAGA AAAACTGCAA ATTGCGCTGG CCCTTGAGCG TATGGGTGTT
GACGTGATGG AAGTCGGTTT CCCCGTCTCT TCGCCGGGCG ATTTTGAATC GGTGCAAACC
ATCGCCCGCC AGGTTAAAAA CAGCCGCGTA TGTGCGTTAG CTCGCTGCGT GGAAAAAGAT
ATCGACGTGG CGGCCGAATC CCTGAAAGTC GCCGAAGCCT TCCGTATTCA TACCTTTATT
GCCACTTCGC CAATGCACAT CGCCACCAAG CTGCGCAGCA CGCTGGACGA GGTGATCGAA
CGCGCTATCT ATATGGTGAA ACGCGCCCGT AATTACACCG ATGATGTTGA ATTTTCTTGC
GAAGATGCCG GGCGTACACC CATTGCCGAT CTGGCGCGAG TGGTCGAAGC GGCGATTAAT
GCCGGTGCCA CCACCATCAA CATTCCGGAC ACCGTGGGCT ACACCATGCC GTTTGAGTTC
GCCGGAATCA TCAGCGGCCT GTATGAACGC GTGCCTAACA TCGACAAAGC CATTATCTCC
GTACATACCC ACGACGATTT GGGCCTGGCG GTCGGAAACT CACTGGCGGC GGTACATGCC
GGTGCACGCC AGGTGGAAGG CGCAATGAAC GGGATCGGCG AGCGTGCCGG AAACTGTTCC
CTGGAAGAAG TCATCATGGC GATCAAAGTT CGTAAGGATA TTCTCAACGT CCACACCGCC
ATTAATCACC AGGAGATATG GCGCACCAGC CAGTTAGTTA GCCAGATTTG TAATATGCCG
ATCCCGGCAA ACAAAGCCAT TGTTGGCAGC GGCGCATTCG CACACTCCTC CGGTATACAC
CAGGATGGCG TGCTGAAAAA CCGCGAAAAC TACGAAATCA TGACACCAGA ATCTATTGGT
CTGAACCAAA TCCAGCTGAA TCTGACCTCT CGTTCGGGGC GTGCGGCGGT GAAACATCGC
ATGGATGAGA TGGGGTATAA AGAAAGTGAA TATAATTTAG ACAATTTGTA CGATGCTTTC
CTGAAGCTGG CGGACAAAAA AGGTCAGGTG TTTGATTACG ATCTGGAGGC GCTGGCCTTC
ATCGGTAAGC AGCAAGAAGA GCCGGAGCAT TTCCGTCTGG ATTACTTCAG CGTGCAGTCT
GGCTCTAACG ATATCGCCAC CGCCGCCGTC AAACTGGCCT GTGGCGAAGA AGTCAAAGCA
GAAGCCGCCA ACGGTAACGG TCCGGTCGAT GCCGTCTATC AGGCAATTAA CCGCATCACT
GAATATAACG TCGAACTGGT GAAATACAGC CTGACCGCCA AAGGCCACGG TAAAGATGCG
CTGGGTCAGG TGGATATCGT CGCTAACTAC AACGGTCGCC GCTTCCACGG CGTCGGCCTG
GCTACCGATA TTGTCGAGTC ATCTGCCAAA GCCATGGTGC ACGTTCTGAA CAATATCTGG
CGTGCCGCAG AAGTCGAAAA AGAGTTGCAA CGCAAAGCTC AACACAACGA AAACAACAAG
GAAACCGTGT GA
 
Protein sequence
MSQQVIIFDT TLRDGEQALQ ASLSVKEKLQ IALALERMGV DVMEVGFPVS SPGDFESVQT 
IARQVKNSRV CALARCVEKD IDVAAESLKV AEAFRIHTFI ATSPMHIATK LRSTLDEVIE
RAIYMVKRAR NYTDDVEFSC EDAGRTPIAD LARVVEAAIN AGATTINIPD TVGYTMPFEF
AGIISGLYER VPNIDKAIIS VHTHDDLGLA VGNSLAAVHA GARQVEGAMN GIGERAGNCS
LEEVIMAIKV RKDILNVHTA INHQEIWRTS QLVSQICNMP IPANKAIVGS GAFAHSSGIH
QDGVLKNREN YEIMTPESIG LNQIQLNLTS RSGRAAVKHR MDEMGYKESE YNLDNLYDAF
LKLADKKGQV FDYDLEALAF IGKQQEEPEH FRLDYFSVQS GSNDIATAAV KLACGEEVKA
EAANGNGPVD AVYQAINRIT EYNVELVKYS LTAKGHGKDA LGQVDIVANY NGRRFHGVGL
ATDIVESSAK AMVHVLNNIW RAAEVEKELQ RKAQHNENNK ETV