Gene EcDH1_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3350 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3600400 
End bp3601551 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content46% 
IMG OID 
ProductIntegrase catalytic region 
Protein accessionACX40970 
Protein GI260450548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGAA CATTTACAGC AGAGGAAAAA GCCTCTGTTT TTGAACTATG GAAGAACGGA 
ACAGGCTTCA GTGAAATAGC GAATATCCTG GGTTCAAAAC CCGGAACGAT CTTCACTATG
TTAAGGGATA CTGGCGGCAT AAAACCCCAT GAGCGTAAGC GGGCTGTAGC TCACCTGACA
CTGTCTGAGC GCGAGGAGAT ACGAGCTGGT TTGTCAGCCA AAATGAGCAT TCGTGCGATA
GCTACTGCGC TGAATCGCAG TCCTTCGACG ATCTCACGTG AAGTTCAGCG TAATCGGGGC
AGACGCTATT ACAAAGCTGT TGATGCTAAT AACCGAGCCA ACAGAATGGC GAAAAGGCCA
AAACCGTGCT TACTGGATCA AAATTTACCA TTGCGAAAGC TTGTTCTGGA AAAGCTGGAG
ATGAAATGGT CTCCAGAGCA AATATCAGGA TGGTTAAGGC GAACAAAACC ACGTCAAAAA
ACGCTGCGAA TATCACCTGA GACAATTTAT AAAACGCTGT ACTTTCGTAG CCGTGAAGCG
CTACACCACC TGAATATACA GCATCTGCGA CGGTCGCATA GCCTTCGCCA TGGCAGGCGT
CATACCCGCA AAGGCGAAAG AGGTACGATT AACATAGTGA ACGGAACACC AATTCACGAA
CGTTCCCGAA ATATCGATAA CAGACGCTCT CTGGGGCATT GGGAGGGCGA TTTAGTCTCA
GGTACAAAAA ACTCTCATAT AGCCACACTT GTAGACCGAA AATCACGTTA TACGATCATC
GTTAGACTCA GGGGCAAAGA TTCTGTCTCA GTAAATCAGG CTCTTACCGA CAAATTCCTG
AGTTTACCGT CAGAACTCAG AAAATCACTG ACATGGGACA GAGGAATGGA ACTGGCCAGA
CATCTAGAAT TTACTGTCAG CACCGGCGTT AAAGTTTACT TCTGCGATCC TCAGAGTCCT
TGGCAGCGGG GAACAAATGA GAATACAAAT GGGCTAATTC GGCAGTACTT TCCTAAAAAG
ACATGTCTTG CCCAATATAC TCAACATGAA CTAGATCTGG TTGCTGCTCA GCTAAACAAC
AGACCGAGAA AGACACTGAA GTTCAAAACA CCGAAAGAGA TAATTGAAAG GGGTGTTGCA
TTGACAGATT GA
 
Protein sequence
MRRTFTAEEK ASVFELWKNG TGFSEIANIL GSKPGTIFTM LRDTGGIKPH ERKRAVAHLT 
LSEREEIRAG LSAKMSIRAI ATALNRSPST ISREVQRNRG RRYYKAVDAN NRANRMAKRP
KPCLLDQNLP LRKLVLEKLE MKWSPEQISG WLRRTKPRQK TLRISPETIY KTLYFRSREA
LHHLNIQHLR RSHSLRHGRR HTRKGERGTI NIVNGTPIHE RSRNIDNRRS LGHWEGDLVS
GTKNSHIATL VDRKSRYTII VRLRGKDSVS VNQALTDKFL SLPSELRKSL TWDRGMELAR
HLEFTVSTGV KVYFCDPQSP WQRGTNENTN GLIRQYFPKK TCLAQYTQHE LDLVAAQLNN
RPRKTLKFKT PKEIIERGVA LTD