Gene EcDH1_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3268 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3512265 
End bp3513164 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content55% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX40892 
Protein GI260450470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCTC GACATATCAA TTATTTTCTT GCCGTGGCTG AACATGGCAG CTTCACCCGT 
GCCGCCAGTG CGTTGCACGT CTCCCAACCT GCGCTTTCCC AGCAGATTCG CCAGTTAGAG
GAGAGTTTAG GCGTGCCGCT GTTTGACCGT AGCGGGCGAA CGATTCGTCT CACTGATGCA
GGAGAAGTCT GGCGACAGTA CGCCAGTCGG GCGTTACAGG AACTGGGGGC GGGTAAACGG
GCGATTCATG ATGTTGCCGA TCTGACGCGA GGATCGCTGC GTATCGCCGT CACCCCCACC
TTTACGAGCT ACTTTATCGG CCCCTTAATG GCGGATTTCT ATGCGCGCTA TCCCAGCATC
ACGCTCCAGC TACAGGAAAT GTCGCAGGAG AAAATCGAGG ATATGCTTTG CCGCGACGAG
TTGGACGTTG GGATTGCCTT CGCGCCTGTG CATTCGCCGG AGCTGGAGGC AATTCCTTTA
CTGACAGAAA GTTTAGCGTT AGTCGTGGCG CAACATCATC CGCTGGCCGT CCATGAACAG
GTGGCGTTGA GTCGCTTGCA TGATGAAAAA CTGGTCCTGC TCAGCGCGGA ATTTGCCACC
AGAGAGCAAA TTGACCACTA CTGCGAGAAA GCGGGGCTAC ATCCACAGGT GGTCATTGAG
GCGAACTCAA TTAGCGCGGT TCTGGAGCTG ATTCGCCGCA CTTCCCTTTC CACATTGTTA
CCAGCAGCGA TTGCCACACA ACATGACGGG CTTAAAGCTA TTTCTCTTGC CCCGCCACTA
CTGGAGAGAA CGGCGGTTTT GTTGCGGCGG AAAAATAGCT GGCAGACAGC CGCCGCGAAG
GCATTTTTGC ACATGGCGTT GGATAAATGC GCGGTTGTTG GCGGAAATGA ATCACGGTAG
 
Protein sequence
MLSRHINYFL AVAEHGSFTR AASALHVSQP ALSQQIRQLE ESLGVPLFDR SGRTIRLTDA 
GEVWRQYASR ALQELGAGKR AIHDVADLTR GSLRIAVTPT FTSYFIGPLM ADFYARYPSI
TLQLQEMSQE KIEDMLCRDE LDVGIAFAPV HSPELEAIPL LTESLALVVA QHHPLAVHEQ
VALSRLHDEK LVLLSAEFAT REQIDHYCEK AGLHPQVVIE ANSISAVLEL IRRTSLSTLL
PAAIATQHDG LKAISLAPPL LERTAVLLRR KNSWQTAAAK AFLHMALDKC AVVGGNESR