Gene EcDH1_3209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3209 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3451771 
End bp3453066 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content53% 
IMG OID 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionACX40835 
Protein GI260450413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.204257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGAAC GGCTGTCGTG GAAAAGGCTG GTGCTGGAGC TGCTACTTTG CTGCCTCCCG 
GCTTTCATCC TGGGTGCATT TTTTGGTTAC CTGCCCTGGT TTTTGCTGGC ATCGGTAACA
GGACTGCTTA TCTGGCATTT CTGGAATTTA TTGCGCCTTT CATGGTGGCT GTGGGTGGAT
CGCAGTATGA CCCCGCCACC GGGGCGTGGT AGCTGGGAAC CGCTACTATA CGGCTTACAC
CAGATGCAGC TGCGAAATAA AAAACGCCGC CGTGAACTGG GCAATCTGAT TAAACGCTTT
CGTAGCGGCG CGGAGTCGCT GCCCGACGCG GTGGTGCTGA CCACGGAAGA GGGCGGTATT
TTCTGGTGTA ACGGTCTGGC GCAACAAATT CTTGGTTTGC GCTGGCCGGA AGATAACGGG
CAGAACATCC TTAACCTACT GCGTTACCCG GAGTTTACGC AATATCTGAA AACGCGTGAT
TTTTCTCGCC CGCTCAATCT GGTGCTCAAC ACCGGGCGGC ATCTGGAAAT TCGCGTCATG
CCTTATACCC ACAAACAGTT GCTGATGGTG GCGCGTGATG TCACGCAAAT GCATCAACTG
GAAGGGGCGC GGCGTAACTT TTTTGCCAAC GTGAGCCATG AGTTACGTAC GCCATTGACC
GTGTTACAGG GTTACCTGGA GATGATGAAT GAGCAGCCGC TGGAAGGCGC GGTACGCGAA
AAAGCGTTGC ACACCATGCG CGAGCAGACC CAGCGGATGG AAGGACTGGT GAAGCAATTG
CTGACGCTGT CGAAAATAGA AGCCGCACCG ACGCATTTGC TCAATGAAAA GGTTGATGTG
CCGATGATGC TGCGCGTTGT TGAGCGCGAG GCTCAGACTC TGAGTCAGAA AAAACAGACA
TTTACCTTTG AGATAGATAA CGGCCTCAAG GTGTCTGGCA ACGAAGATCA GCTACGCAGT
GCGATTTCGA ACCTGGTCTA TAACGCCGTG AATCATACGC CGGAAGGCAC GCATATCACC
GTACGCTGGC AGCGAGTGCC GCACGGTGCC GAATTTAGCG TTGAAGATAA CGGACCGGGC
ATTGCACCGG AGCATATTCC GCGCCTGACC GAGCGTTTTT ATCGCGTTGA TAAAGCGCGT
TCCCGGCAAA CCGGCGGTAG CGGATTAGGG TTAGCGATCG TGAAACATGC TGTGAATCAT
CACGAAAGTC GCCTGAATAT TGAGAGTACA GTAGGAAAAG GAACACGTTT CAGTTTTGTT
ATCCCGGAAC GTTTAATTGC CAAAAACAGC GATTAA
 
Protein sequence
MLERLSWKRL VLELLLCCLP AFILGAFFGY LPWFLLASVT GLLIWHFWNL LRLSWWLWVD 
RSMTPPPGRG SWEPLLYGLH QMQLRNKKRR RELGNLIKRF RSGAESLPDA VVLTTEEGGI
FWCNGLAQQI LGLRWPEDNG QNILNLLRYP EFTQYLKTRD FSRPLNLVLN TGRHLEIRVM
PYTHKQLLMV ARDVTQMHQL EGARRNFFAN VSHELRTPLT VLQGYLEMMN EQPLEGAVRE
KALHTMREQT QRMEGLVKQL LTLSKIEAAP THLLNEKVDV PMMLRVVERE AQTLSQKKQT
FTFEIDNGLK VSGNEDQLRS AISNLVYNAV NHTPEGTHIT VRWQRVPHGA EFSVEDNGPG
IAPEHIPRLT ERFYRVDKAR SRQTGGSGLG LAIVKHAVNH HESRLNIEST VGKGTRFSFV
IPERLIAKNS D