| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3090 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3317855 |
|---|
| End bp | 3318364 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
|---|
| Protein accession | ACX40716 |
|---|
| Protein GI | 260450294 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000000279309 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCC GCAATAATCC GGCGCGTGTC GCCATCGTGA TGGGGTCCAA AAGCGACTGG
GCTACCATGC AGTTCGCCGC CGAAATCTTC GAAATCCTGA ATGTCCCGCA CCACGTTGAA
GTGGTTTCTG CTCACCGCAC CCCCGATAAA CTGTTCAGCT TCGCCGAAAG CGCCGAAGAG
AACGGTTATC AGGTGATTAT TGCGGGCGCA GGCGGCGCAG CGCATCTGCC AGGCATGATT
GCCGCCAAAA CGCTGGTGCC GGTGCTGGGC GTGCCAGTAC AGAGCGCCGC ACTGAGCGGT
GTCGATAGCC TCTACTCCAT CGTACAAATG CCGCGCGGCA TTCCGGTGGG TACGCTGGCG
ATTGGTAAAG CTGGCGCGGC AAACGCGGCG TTACTGGCAG CACAAATTCT TGCGACTCAT
GATAAAGAAC TGCACCAGCG TCTGAATGAC TGGCGCAAAG CCCAGACCGA CGAAGTGCTG
GAAAACCCGG ACCCGCGAGG TGCGGCATGA
|
|---|
| Protein sequence | MSSRNNPARV AIVMGSKSDW ATMQFAAEIF EILNVPHHVE VVSAHRTPDK LFSFAESAEE
NGYQVIIAGA GGAAHLPGMI AAKTLVPVLG VPVQSAALSG VDSLYSIVQM PRGIPVGTLA
IGKAGAANAA LLAAQILATH DKELHQRLND WRKAQTDEVL ENPDPRGAA
|
|---|
| |