Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_3081 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 3308655 |
End bp | 3311258 |
Gene Length | 2604 bp |
Protein Length | 867 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | fimbrial biogenesis outer membrane usher protein |
Protein accession | ACX40707 |
Protein GI | 260450285 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAC CCACTACTAC GGATATTCCG CAGAGGTATA CCTGGTGTCT GGCCGGAATT TGTTATTCAT CTCTTGCCAT TTTACCCTCC TTTTTAAGCT ATGCGGAAAG TTATTTCAAC CCGGCATTTT TATTAGAGAA TGGCACATCC GTTGCTGATT TATCGCGCTT TGAGAGAGGT AATCATCAAC CTGCGGGCGT GTATCGGGTG GATCTCTGGC GTAATGATGA GTTCATTGGT TCGCAGGATA TCGTATTTGA ATCGACAACA GAAAATACAG GTGATAAATC AGGTGGGTTA ATGCCCTGTT TTAACCAGGT ACTTCTTGAA CGAATTGGCC TTAATAGCAG TGCATTTCCC GAGTTAGCCC AGCAGCAAAA CAATAAATGC ATCAATTTAC TGAAAGCTGT ACCTGATGCC ACAATTAACT TTGATTTTGC AGCGATGCGC CTGAACATCA CTATTCCTCA GATAGCGTTG TTGAGTAGCG CTCACGGTTA CATTCCGCCT GAAGAGTGGG ATGAAGGTAT TCCTGCTTTA CTCCTGAATT ATAATTTCAC CGGTAACAGA GGTAATGGTA ACGATAGCTA TTTTTTTAGT GAGCTCAGCG GGATTAATAT TGGCCCGTGG CGTTTACGCA ACAATGGTTC CTGGAACTAT TTTCGCGGAA ATGGATATCA TTCAGAACAG TGGAATAATA TTGGCACCTG GGTACAGCGC GCCATTATTC CGCTGAAAAG TGAACTGGTA ATGGGAGACG GCAATACAGG AAGTGATATT TTCGATGGCG TTGGATTTCG TGGTGTACGG CTTTATTCTT CTGATAATAT GTATCCTGAT AGCCAGCAAG GGTTTGCCCC AACGGTACGT GGGATTGCCC GTACGGCGGC CCAGCTAACG ATTCGGCAAA ATGGTTTTAT TATCTATCAA AGCTATGTTT CCCCCGGCGC TTTTGAAATT ACAGATTTGC ACCCGACATC TTCAAATGGC GATCTGGACG TCACCATCGA CGAGCGCGAT GGCAATCAGC AGAATTACAC AATTCCGTAT TCAACAGTGC CAATTTTACA ACGCGAAGGG CGTTTCAAAT TTGACCTGAC GGCGGGCGAT TTTCGTAGCG GTAATAGTCA GCAATCATCG CCTTTCTTTT TTCAGGGTAC GGCACTCGGC GGTTTACCAC AGGAATTTAC TGCCTACGGC GGGACGCAAT TATCTGCCAA TTACACCGCC TTTTTATTAG GGCTGGGGCG CAATCTCGGG AACTGGGGCG CAGTGTCGCT GGATGTAACG CATGCGCGCA GTCAGTTAGC CGACGCCAGT CGTCATGAGG GGGATTCTAT TCGCTTCCTC TATGCGAAAT CGATGAACAC CTTCGGCACC AATTTTCAGT TAATGGGTTA CCGCTATTCG ACACAAGGTT TTTATACCCT TGATGATGTT GCGTATCGTC GAATGGAGGG GTACGAATAT GATTACGACG GTGAGCATCG CGATGAACCG ATAATCGTGA ATTACCACAA TTTACGCTTT AGCCGTAAAG ACCGTTTGCA GTTAAATGTT TCACAATCAC TTAATGACTT TGGCTCGCTT TATATTTCTG GTACCCATCA AAAATACTGG AATACTTCGG ATTCAGATAC GTGGTATCAG GTGGGGTATA CCAGCAGCTG GGTTGGCATC AGTTATTCGC TCTCATTTTC GTGGAATGAA TCTGTAGGGA TCCCCGATAA CGAACGTATT GTCGGACTTA ATGTTTCAGT GCCTTTCAAT GTTTTGACCA AACGTCGCTA CACCCGGGAA AATGCGCTCG ACCGCGCTTA TGCCTCCTTT AACGCCAACC GTAACAGCAA CGGGCAAAAT AGCTGGCTGG CAGGTGTAGG TGGGACCTTA CTGGAAGGCC ACAACCTGAG TTATCACGTA AGCCAGGGTG ATACCTCGAA TAATGGGTAC ACGGGCAGCG CCACGGCAAA CTGGCAGGCC GCTTACGGTA CGCTGGGGGG CGGGTATAAC TACGACCGCG ATCAACATGA CGTTAACTGG CAGCTGTCTG GCGGTGTGGT CGGGCATGAA AATGGCATAA CGCTGAGCCA GCCTTTAGGG GATACCAATG TTTTGATTAA AGCGCCTGGC GCAGGCGGTG TACGCATTGA AAATCAAACT GGCATTTTAA CCGACTGGCG CGGCTATGCG GTGATGCTGT ATGCCACGGT TTATCGGTAT AACCGTATCG CGCTTGATAC CAATACGATG GGGAATTCCA TCGATGTTGA AAAAAATATT AGCAGCGTTG TGCCGACGCA AGGCGCGTTG GTTCGTGCCA ATTTTGATAC CCGCATAGGC GTGCGGGCGC TCATTACCGT TACCCAGGGC GGAAAACCGG TGCCGTTTGG ATCACTGGTA CGGGAAAACA GTACCGGAAT AACCAGTATG GTGGGTGATG ACGGGCAAGT TTATTTAAGT GGTGCGCCAT TGTCTGGTGA ATTACTGGTT CAGTGGGGAG ACGGCGCGAA CTCACGCTGC ATTGCGCACT ATGTATTGCC GAAGCAAAGC TTACAGCAAG CCGTCACTGT TATTTCGGCA GTTTGCACAC ATCCTGGCTC ATAA
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Protein sequence | MKIPTTTDIP QRYTWCLAGI CYSSLAILPS FLSYAESYFN PAFLLENGTS VADLSRFERG NHQPAGVYRV DLWRNDEFIG SQDIVFESTT ENTGDKSGGL MPCFNQVLLE RIGLNSSAFP ELAQQQNNKC INLLKAVPDA TINFDFAAMR LNITIPQIAL LSSAHGYIPP EEWDEGIPAL LLNYNFTGNR GNGNDSYFFS ELSGINIGPW RLRNNGSWNY FRGNGYHSEQ WNNIGTWVQR AIIPLKSELV MGDGNTGSDI FDGVGFRGVR LYSSDNMYPD SQQGFAPTVR GIARTAAQLT IRQNGFIIYQ SYVSPGAFEI TDLHPTSSNG DLDVTIDERD GNQQNYTIPY STVPILQREG RFKFDLTAGD FRSGNSQQSS PFFFQGTALG GLPQEFTAYG GTQLSANYTA FLLGLGRNLG NWGAVSLDVT HARSQLADAS RHEGDSIRFL YAKSMNTFGT NFQLMGYRYS TQGFYTLDDV AYRRMEGYEY DYDGEHRDEP IIVNYHNLRF SRKDRLQLNV SQSLNDFGSL YISGTHQKYW NTSDSDTWYQ VGYTSSWVGI SYSLSFSWNE SVGIPDNERI VGLNVSVPFN VLTKRRYTRE NALDRAYASF NANRNSNGQN SWLAGVGGTL LEGHNLSYHV SQGDTSNNGY TGSATANWQA AYGTLGGGYN YDRDQHDVNW QLSGGVVGHE NGITLSQPLG DTNVLIKAPG AGGVRIENQT GILTDWRGYA VMLYATVYRY NRIALDTNTM GNSIDVEKNI SSVVPTQGAL VRANFDTRIG VRALITVTQG GKPVPFGSLV RENSTGITSM VGDDGQVYLS GAPLSGELLV QWGDGANSRC IAHYVLPKQS LQQAVTVISA VCTHPGS
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