Gene EcDH1_2958 details

Gene Information

• Locus tag: EcDH1_2958
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: -
• Start bp: 3175229
• End bp: 3177175
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 55%
• Product: PTS system, N-acetylglucosamine-specific IIBC subunit
• Protein accession: ACX40587
• Protein GI: 260450165

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATTT TAGGTTTTTT CCAGCGACTC GGTAGGGCGT TACAGCTCCC TATCGCGGTG 
CTGCCGGTGG CGGCACTGTT GCTGCGATTC GGTCAGCCAG ATTTACTTAA CGTTGCGTTT 
ATTGCCCAGG CGGGCGGTGC GATTTTTGAT AACCTCGCAT TAATCTTCGC CATCGGTGTG 
GCATCCAGCT GGTCGAAAGA CAGCGCTGGT GCGGCGGCGC TGGCGGGTGC GGTAGGTTAC 
TTTGTGTTAA CCAAAGCGAT GGTGACCATC AACCCAGAAA TTAACATGGG TGTACTGGCG 
GGTATCATTA CCGGTCTGGT TGGTGGCGCA GCCTATAACC GTTGGTCCGA TATTAAACTG 
CCGGACTTCC TGAGCTTCTT CGGCGGCAAA CGCTTTGTGC CGATTGCCAC CGGATTCTTC 
TGCCTGGTGC TGGCGGCCAT TTTTGGTTAC GTCTGGCCGC CGGTACAGCA CGCTATCCAT 
GCAGGCGGCG AGTGGATCGT TTCTGCGGGC GCGCTGGGTT CCGGTATCTT TGGTTTCATC 
AACCGTCTGC TGATCCCAAC CGGTCTGCAT CAGGTACTGA ACACCATCGC CTGGTTCCAG 
ATTGGTGAAT TCACCAACGC GGCGGGTACG GTTTTCCACG GTGACATTAA CCGCTTCTAT 
GCCGGTGACG GCACCGCGGG GATGTTCATG TCCGGCTTCT TCCCGATCAT GATGTTCGGT 
CTGCCGGGTG CGGCGCTGGC GATGTACTTC GCAGCACCGA AAGAGCGTCG TCCGATGGTT 
GGCGGTATGC TGCTTTCTGT TGCTGTTACT GCGTTCCTGA CCGGTGTGAC TGAGCCGCTG 
GAATTCCTGT TCATGTTCCT TGCTCCGCTG CTGTACCTCC TGCACGCACT GCTGACCGGT 
ATCAGCCTGT TTGTGGCAAC GCTGCTGGGT ATCCACGCGG GCTTCTCTTT CTCTGCGGGG 
GCTATCGACT ACGCGTTGAT GTATAACCTG CCGGCCGCCA GCCAGAACGT CTGGATGCTG 
CTGGTGATGG GCGTTATCTT CTTCGCTATC TACTTCGTGG TGTTCAGTTT GGTTATCCGC 
ATGTTCAACC TGAAAACGCC GGGTCGTGAA GATAAAGAAG ACGAGATCGT TACTGAAGAA 
GCCAACAGCA ACACTGAAGA AGGTCTGACT CAACTGGCAA CCAACTATAT TGCTGCGGTT 
GGCGGCACTG ACAACCTGAA AGCGATTGAC GCCTGTATCA CCCGTCTGCG CCTTACAGTG 
GCTGACTCTG CCCGCGTTAA CGATACGATG TGTAAACGTC TGGGTGCTTC TGGGGTAGTG 
AAACTGAACA AACAGACTAT TCAGGTGATT GTTGGCGCGA AAGCAGAATC CATCGGCGAT 
GCGATGAAGA AAGTCGTTGC CCGTGGTCCG GTAGCCGCTG CGTCAGCTGA AGCAACTCCG 
GCAACTGCCG CGCCTGTAGC AAAACCGCAG GCTGTACCAA ACGCGGTATC TATCGCGGAG 
CTGGTATCGC CGATTACCGG TGATGTCGTG GCACTGGATC AGGTTCCTGA CGAAGCATTC 
GCCAGCAAAG CGGTGGGTGA CGGTGTGGCG GTGAAACCGA CAGATAAAAT CGTCGTATCA 
CCAGCCGCAG GGACAATCGT GAAAATCTTC AACACCAACC ACGCGTTCTG CCTGGAAACC 
GAAAAAGGCG CGGAGATCGT CGTCCATATG GGTATCGACA CCGTAGCGCT GGAAGGTAAA 
GGCTTTAAAC GTCTGGTGGA AGAGGGTGCG CAGGTAAGCG CAGGGCAACC GATTCTGGAA 
ATGGATCTGG ATTACCTGAA CGCTAACGCC CGCTCGATGA TTAGCCCGGT GGTTTGCAGC 
AATATCGACG ATTTCAGTGG CTTGATCATT AAAGCTCAGG GCCATATTGT GGCGGGTCAA 
ACACCGCTGT ATGAAATCAA AAAGTAA 

 

Protein sequence

MNILGFFQRL GRALQLPIAV LPVAALLLRF GQPDLLNVAF IAQAGGAIFD NLALIFAIGV 
ASSWSKDSAG AAALAGAVGY FVLTKAMVTI NPEINMGVLA GIITGLVGGA AYNRWSDIKL 
PDFLSFFGGK RFVPIATGFF CLVLAAIFGY VWPPVQHAIH AGGEWIVSAG ALGSGIFGFI 
NRLLIPTGLH QVLNTIAWFQ IGEFTNAAGT VFHGDINRFY AGDGTAGMFM SGFFPIMMFG 
LPGAALAMYF AAPKERRPMV GGMLLSVAVT AFLTGVTEPL EFLFMFLAPL LYLLHALLTG 
ISLFVATLLG IHAGFSFSAG AIDYALMYNL PAASQNVWML LVMGVIFFAI YFVVFSLVIR 
MFNLKTPGRE DKEDEIVTEE ANSNTEEGLT QLATNYIAAV GGTDNLKAID ACITRLRLTV 
ADSARVNDTM CKRLGASGVV KLNKQTIQVI VGAKAESIGD AMKKVVARGP VAAASAEATP 
ATAAPVAKPQ AVPNAVSIAE LVSPITGDVV ALDQVPDEAF ASKAVGDGVA VKPTDKIVVS 
PAAGTIVKIF NTNHAFCLET EKGAEIVVHM GIDTVALEGK GFKRLVEEGA QVSAGQPILE 
MDLDYLNANA RSMISPVVCS NIDDFSGLII KAQGHIVAGQ TPLYEIKK