| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2945 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3162854 |
|---|
| End bp | 3164173 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | arginine/ornithine antiporter |
|---|
| Protein accession | ACX40576 |
|---|
| Protein GI | 260450154 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGG CTAAATCGAA CAAAATGGGC GTCGTTCAGT TAACCATACT GACGATGGTC
AACATGATGG GCTCCGGTAT CATCATGCTG CCGACAAAGC TTGCCGAAGT CGGGACAATC
TCAATTATCT CCTGGCTGGT GACAGCCGTA GGCTCAATGG CACTGGCATG GGCATTCGCA
AAATGCGGTA TGTTCAGCCG TAAATCAGGC GGTATGGGCG GTTATGCCGA GTATGCTTTC
GGTAAATCCG GTAACTTTAT GGCGAACTAT ACCTACGGCG TCTCACTGCT GATTGCTAAC
GTCGCGATTG CTATTTCGGC GGTTGGTTAC GGCACCGAAC TGCTCGGCGC GAGTTTGTCG
CCAGTGCAGA TTGGTCTTGC GACCATCGGG GTGCTGTGGA TTTGTACCGT GGCTAACTTT
GGTGGTGCGC GCATTACCGG GCAAATCAGT AGCATTACCG TGTGGGGGGT CATTATTCCG
GTCGTCGGTC TGTGCATTAT TGGCTGGTTC TGGTTTAGCC CGACGCTGTA CGTTGATTCC
TGGAATCCGC ATCATGCACC GTTCTTCAGT GCGGTAGGTT CTTCCATCGC TATGACGCTG
TGGGCTTTTC TTGGTCTGGA GTCTGCGTGT GCGAATACTG ATGTAGTGGA AAACCCGGAA
CGTAATGTGC CAATCGCGGT ACTCGGCGGT ACGTTAGGTG CGGCGGTGAT TTATATCGTC
TCCACCAACG TGATTGCCGG GATTGTGCCA AATATGGAGC TGGCAAATTC AACGGCACCA
TTTGGTCTGG CCTTCGCGCA GATGTTCACG CCGGAAGTGG GTAAAGTCAT TATGGCGCTG
ATGGTGATGT CCTGCTGCGG TTCGCTACTT GGCTGGCAGT TCACCATTGC CCAGGTGTTT
AAATCTTCAT CTGATGAAGG CTACTTCCCT AAAATTTTCT CCCGTGTAAC CAAAGTGGAT
GCACCGGTGC AGGGAATGTT GACCATTGTG ATTATTCAGA GTGGATTGGC ACTGATGACC
ATTAGCCCGT CGCTAAACAG TCAGTTCAAC GTGCTGGTTA ACCTGGCCGT GGTGACCAAT
ATCATTCCGT ATATTCTGTC AATGGCGGCA TTAGTCATTA TTCAGAAGGT CGCTAATGTG
CCCCCCTCAA AAGCGAAAGT TGCAAACTTT GTTGCTTTTG TTGGCGCGAT GTATAGCTTT
TATGCGCTGT ACTCATCCGG GGAAGAAGCC ATGCTGTACG GTTCCATCGT GACCTTCCTT
GGTTGGACAC TGTATGGTCT GGTATCACCA CGCTTTGAAC TGAAAAATAA ACACGGTTAA
|
|---|
| Protein sequence | MSQAKSNKMG VVQLTILTMV NMMGSGIIML PTKLAEVGTI SIISWLVTAV GSMALAWAFA
KCGMFSRKSG GMGGYAEYAF GKSGNFMANY TYGVSLLIAN VAIAISAVGY GTELLGASLS
PVQIGLATIG VLWICTVANF GGARITGQIS SITVWGVIIP VVGLCIIGWF WFSPTLYVDS
WNPHHAPFFS AVGSSIAMTL WAFLGLESAC ANTDVVENPE RNVPIAVLGG TLGAAVIYIV
STNVIAGIVP NMELANSTAP FGLAFAQMFT PEVGKVIMAL MVMSCCGSLL GWQFTIAQVF
KSSSDEGYFP KIFSRVTKVD APVQGMLTIV IIQSGLALMT ISPSLNSQFN VLVNLAVVTN
IIPYILSMAA LVIIQKVANV PPSKAKVANF VAFVGAMYSF YALYSSGEEA MLYGSIVTFL
GWTLYGLVSP RFELKNKHG
|
|---|
| |