Gene EcDH1_2822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2822 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3023564 
End bp3025156 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content53% 
IMG OID 
ProductABC transporter related protein 
Protein accessionACX40455 
Protein GI260450033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.596097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAGTTT CCAGTAACGT CACCATGCAG TTCGGCAGTA AGCCGTTGTT TGAAAACATT 
TCCGTCAAAT TTGGCGGCGG CAACCGTTAC GGCCTGATTG GCGCGAACGG TAGTGGTAAA
TCCACCTTTA TGAAGATCCT CGGCGGCGAC CTTGAGCCGA CGCTGGGTAA CGTTTCCCTC
GATCCCAACG AGCGCATTGG TAAACTGCGT CAGGATCAGT TTGCCTTTGA AGAGTTCACT
GTGCTGGATA CGGTGATCAT GGGGCATAAA GAGTTGTGGG AAGTGAAGCA GGAGCGCGAC
CGCATCTATG CTTTGCCGGA AATGAGTGAA GAAGACGGCT ATAAAGTGGC CGATCTGGAA
GTTAAATACG GCGAAATGGA CGGTTACTCT GCGGAAGCTC GCGCCGGTGA ACTGTTGCTT
GGCGTGGGAA TTCCAGTGGA ACAGCACTAC GGCCCGATGA GTGAAGTTGC TCCTGGCTGG
AAGCTGCGTG TGCTTCTGGC GCAGGCGCTG TTTGCTGATC CGGATATTCT CCTGCTCGAC
GAACCGACCA ACAACCTCGA CATCGACACC ATTCGCTGGC TGGAACAGGT GCTGAACGAG
CGTGACAGCA CCATGATCAT CATCTCGCAC GACCGTCACT TCCTTAACAT GGTCTGTACC
CACATGGCGG ATCTGGATTA CGGCGAGCTG CGCGTTTATC CGGGTAACTA CGATGAGTAC
ATGACGGCGG CGACCCAGGC GCGTGAACGT CTGCTGGCCG ATAACGCCAA GAAGAAAGCG
CAGATTGCTG AGTTGCAATC TTTCGTTAGC CGCTTTAGCG CCAACGCCTC GAAATCTCGC
CAGGCAACTT CGCGCGCGCG CCAGATTGAT AAAATCAAAC TGGAAGAGGT GAAAGCCTCC
AGCCGTCAGA ACCCGTTCAT CCGTTTTGAA CAGGATAAGA AACTGTTCCG TAACGCGCTG
GAAGTGGAAG GTCTGACCAA AGGGTTTGAT AACGGTCCGC TGTTTAAAAA TCTCAACCTG
CTGCTGGAAG TGGGTGAAAA ACTGGCGGTA CTGGGTACCA ACGGCGTCGG TAAATCAACG
CTGCTGAAAA CGCTGGTGGG CGATCTGCAA CCGGACAGCG GCACCGTAAA ATGGTCTGAG
AACGCGCGCA TTGGTTACTA TGCTCAGGAC CACGAATATG AGTTTGAAAA TGATCTGACC
GTGTTCGAAT GGATGAGCCA GTGGAAGCAG GAAGGCGATG ACGAGCAGGC GGTACGCAGT
ATTCTCGGTC GTTTGCTGTT CAGCCAGGAC GACATCAAAA AGCCAGCTAA AGTGCTTTCC
GGTGGGGAAA AAGGGCGGAT GCTGTTTGGT AAGTTAATGA TGCAGAAGCC GAACATTCTG
ATCATGGACG AACCGACCAA CCACCTGGAT ATGGAATCCA TTGAGTCGCT GAACATGGCA
CTGGAACTGT ATCAGGGCAC GCTGATCTTT GTTTCACACG ACCGTGAGTT CGTAAGCTCC
CTGGCGACCC GCATTCTGGA AATCACCCCG GAACGCGTGA TCGACTTTAG CGGTAATTAC
GAAGATTACC TGCGTAGTAA AGGGATCGAG TAA
 
Protein sequence
MLVSSNVTMQ FGSKPLFENI SVKFGGGNRY GLIGANGSGK STFMKILGGD LEPTLGNVSL 
DPNERIGKLR QDQFAFEEFT VLDTVIMGHK ELWEVKQERD RIYALPEMSE EDGYKVADLE
VKYGEMDGYS AEARAGELLL GVGIPVEQHY GPMSEVAPGW KLRVLLAQAL FADPDILLLD
EPTNNLDIDT IRWLEQVLNE RDSTMIIISH DRHFLNMVCT HMADLDYGEL RVYPGNYDEY
MTAATQARER LLADNAKKKA QIAELQSFVS RFSANASKSR QATSRARQID KIKLEEVKAS
SRQNPFIRFE QDKKLFRNAL EVEGLTKGFD NGPLFKNLNL LLEVGEKLAV LGTNGVGKST
LLKTLVGDLQ PDSGTVKWSE NARIGYYAQD HEYEFENDLT VFEWMSQWKQ EGDDEQAVRS
ILGRLLFSQD DIKKPAKVLS GGEKGRMLFG KLMMQKPNIL IMDEPTNHLD MESIESLNMA
LELYQGTLIF VSHDREFVSS LATRILEITP ERVIDFSGNY EDYLRSKGIE