| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2707 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 2884175 |
|---|
| End bp | 2885134 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein |
|---|
| Protein accession | ACX40340 |
|---|
| Protein GI | 260449918 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.860316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAACA TCATTAAACT GGCGCTGGCG GGATTGCTTA GCGTCTCTAC TTTTGCGGTT
GCTGCAGAAT CCTCGCCTGA AGCGTTACGT ATAGGCTATC AGAAAGGCAG TATTGGTATG
GTGCTGGCAA AAAGCCACCA GTTACTGGAA AAACGCTATC CGGAATCAAA AATCTCCTGG
GTGGAGTTCC CCGCGGGTCC GCAAATGTTG GAAGCGTTAA ACGTTGGCAG TATTGATCTC
GGCAGTACCG GGGATATTCC GCCAATCTTT GCCCAGGCTG CCGGGGCTGA TTTGGTGTAC
GTGGGCGTCG AGCCACCGAA GCCCAAAGCC GAAGTGATTC TGGTGGCAGA AAACAGCCCG
ATCAAAACCG TAGCCGATCT TAAAGGTCAC AAAGTTGCCT TTCAGAAAGG TTCCAGTTCA
CACAACCTTT TACTGCGTGC ACTGCGTCAG GCCGGACTTA AGTTTACCGA TATCCAACCC
ACTTACCTGA CGCCCGCTGA TGCCCGCGCC GCGTTCCAGC AAGGTAACGT TGACGCCTGG
GCTATCTGGG ATCCCTACTA CTCTGCTGCA TTATTACAGG GCGGCGTGCG GGTGCTGAAA
GACGGCACCG ATCTCAATCA AACTGGATCG TTTTATCTGG CAGCTCGTCC CTATGCAGAA
AAAAACGGCG CTTTTATTCA GGGCGTACTG GCAACCTTTA GTGAGGCCGA TGCGTTAACC
CGCAGCCAGC GCGAGCAAAG CATCGCTTTA CTGGCAAAAA CGATGGGCTT ACCGGCACCG
GTGATTGCCT CTTACTTAGA TCATCGCCCT CCTACCACCA TCAAACCGGT TAACGCCGAG
GTTGCCGCCT TACAGCAGCA AACGGCAGAT CTGTTTTATG AAAATCGTCT GGTGCCGAAA
AAAGTCGATA TTCGCCAGCG CATCTGGCAG CCCACTCAAC TGGAAGGAAA ACAATTATGA
|
|---|
| Protein sequence | MRNIIKLALA GLLSVSTFAV AAESSPEALR IGYQKGSIGM VLAKSHQLLE KRYPESKISW
VEFPAGPQML EALNVGSIDL GSTGDIPPIF AQAAGADLVY VGVEPPKPKA EVILVAENSP
IKTVADLKGH KVAFQKGSSS HNLLLRALRQ AGLKFTDIQP TYLTPADARA AFQQGNVDAW
AIWDPYYSAA LLQGGVRVLK DGTDLNQTGS FYLAARPYAE KNGAFIQGVL ATFSEADALT
RSQREQSIAL LAKTMGLPAP VIASYLDHRP PTTIKPVNAE VAALQQQTAD LFYENRLVPK
KVDIRQRIWQ PTQLEGKQL
|
|---|
| |