Gene EcDH1_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2647 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2823165 
End bp2823857 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content52% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionACX40281 
Protein GI260449859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.149157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACATC ACATTGTTAT TGTTGAAGAT GAGCCGGTTA CCCAGGCGCG ATTACAATCC 
TACTTCACTC AGGAGGGGTA TACCGTTTCC GTTACGGCGA GCGGTGCTGG GCTACGGGAA
ATTATGCAGA ATCAGTCGGT AGATTTAATT CTGCTGGATA TCAACTTACC CGATGAAAAT
GGCCTGATGT TAACCCGCGC CCTGCGAGAA CGCTCAACGG TGGGGATTAT TCTGGTTACC
GGACGCAGCG ATCGGATTGA CCGTATTGTT GGGCTGGAAA TGGGCGCAGA CGATTACGTC
ACCAAACCGC TGGAACTGCG CGAACTGGTA GTACGGGTGA AAAATCTGCT CTGGCGAATC
GACCTCGCGC GACAAGCTCA ACCGCACACT CAGGACAACT GCTATCGCTT TGCCGGTTAT
TGCCTGAATG TGTCGCGCCA TACGCTGGAG CGGGATGGCG AGCCGATTAA ACTGACCCGC
GCAGAGTATG AAATGTTGGT GGCATTTGTG ACGAATCCGG GCGAAATTCT CAGCCGTGAA
CGTCTGCTAC GTATGCTTTC TGCGCGTCGG GTGGAAAACC CTGACCTGCG CACCGTCGAT
GTGTTAATTC GTCGTTTACG TCATAAACTC AGCGCGGATT TACTGGTGAC GCAACATGGT
GAAGGTTATT TCTTAGCCGC TGATGTGTGC TGA
 
Protein sequence
MPHHIVIVED EPVTQARLQS YFTQEGYTVS VTASGAGLRE IMQNQSVDLI LLDINLPDEN 
GLMLTRALRE RSTVGIILVT GRSDRIDRIV GLEMGADDYV TKPLELRELV VRVKNLLWRI
DLARQAQPHT QDNCYRFAGY CLNVSRHTLE RDGEPIKLTR AEYEMLVAFV TNPGEILSRE
RLLRMLSARR VENPDLRTVD VLIRRLRHKL SADLLVTQHG EGYFLAADVC