Gene EcDH1_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2536 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2710907 
End bp2711539 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content51% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionACX40172 
Protein GI260449750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.018218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTG ACTCAACACA ATGTGTAAAA AAAAGCCGTG GCCGCCCAAA AGTGTTCGAC 
AGGGATGCCG CGCTTGATAA GGCCATGAAA TTGTTCTGGC AACACGGTTA TGAAGCGACT
TCTCTTGCGG ACCTCGTCGA AGCGACCGGA GCCAAAGCGC CCACGCTATA CGCGGAATTT
ACCAACAAAG AGGGGTTATT TCGTGCCGTT CTCGACCGCT ATATCGATCG TTTTGCCGCT
AAGCATGAAG CACAGCTGTT TTGTGAAGAG AAAAGCGTGG AGTCTGCGCT GGCTGACTAT
TTTGCTGCCA TCGCCAACTG CTTTACCAGC AAAGACACCC CGGCAGGCTG CTTCATGATC
AACAACTGCA CCACCCTCTC CCCAGATTCA GGAGATATCG CCAATACGTT GAAATCACGC
CATGCGATGC AAGAGCGCAC TTTGCAGCAG TTTTTATGTC AACGACAAGC GCGCGGGGAA
ATCCCGCCCC ACTGTGACGT GACACATCTG GCAGAATTCC TTAATTGTAT TATTCAGGGG
ATGTCGATCA GCGCACGCGA AGGTGCATCG CTGGAAAAAC TGATGCAGAT TGCCGGAACG
ACTTTGCGTT TATGGCCCGA ACTGGTGAAA TAA
 
Protein sequence
MATDSTQCVK KSRGRPKVFD RDAALDKAMK LFWQHGYEAT SLADLVEATG AKAPTLYAEF 
TNKEGLFRAV LDRYIDRFAA KHEAQLFCEE KSVESALADY FAAIANCFTS KDTPAGCFMI
NNCTTLSPDS GDIANTLKSR HAMQERTLQQ FLCQRQARGE IPPHCDVTHL AEFLNCIIQG
MSISAREGAS LEKLMQIAGT TLRLWPELVK