| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2434 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | - |
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| Start bp | 2611162 |
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| End bp | 2611554 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | Invasion gene expression up-regulator SirB |
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| Protein accession | ACX40074 |
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| Protein GI | 260449652 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00146716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAGTT TTTCTACACT GCTTAGTGTT CATCTTATTA GTATCGCGCT TTCTGTTGGG
CTATTAACCT TACGTTTCTG GCTACGTTAT CAGAAGCATC CACAGGCATT TGCTCGCTGG
ACGCGCATTG TGCCGCCGGT TGTCGATACG CTGTTACTGT TAAGCGGCAT TGCGTTGATG
GCTAAAGCGC ACATCCTGCC ATTTTCCGGG CAGGCACAGT GGCTGACTGA AAAGCTGTTT
GGAGTTATCA TTTATATCGT TTTGGGTTTT ATTGCACTCG ATTATCGTCG TATGCACAGT
CAGCAGGCGC GCATTATTGC CTTCCCGCTG GCGTTGGTGG TGCTGTACAT CATCATTAAA
CTCGCCACCA CAAAAGTACC GTTACTGGGG TAA
|
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| Protein sequence | MTSFSTLLSV HLISIALSVG LLTLRFWLRY QKHPQAFARW TRIVPPVVDT LLLLSGIALM
AKAHILPFSG QAQWLTEKLF GVIIYIVLGF IALDYRRMHS QQARIIAFPL ALVVLYIIIK
LATTKVPLLG
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