Gene EcDH1_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2433 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2610349 
End bp2611158 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content46% 
IMG OID 
ProductsirB1 protein 
Protein accessionACX40073 
Protein GI260449651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00804318 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCGT TAGCTGATTT CGAATTTAAT AAAGCGCCAT TGTGCGAAGG CATGATCCTG 
GCTTGCGAAG CAATCCGCCG CGATTTTCCC TCGCAAGATG TTTACGACGA ACTGGAGCGT
CTCGTTAGTC TGGCGAAGGA AGAAATCAGC CAGCTTCTGC CTTTAGAAGA GCAGTTGGAA
AAACTGATCG CGCTGTTTTA CGGCGACTGG GGATTTAAAG CCTCACGCGG TGTTTATCGT
CTTTCCGATG CATTATGGCT GGACCAGGTG TTAAAGAATC GACAGGGCAG TGCGGTATCA
TTAGGTGCGG TTTTATTATG GGTCGCGAAT CGTCTCGATT TGCCGCTGCT GCCGGTGATT
TTCCCTACGC AGCTGATATT GCGCATTGAA TGTCCGGATG GCGAAATTTG GCTGATTAAT
CCTTTTAACG GTGAATCGTT AAGCGAACAT ATGCTGGACG TATGGTTAAA GGGAAATATC
AGCCCGTCGG CGGAACTGTT TTATGAAGAC CTTGATGAAG CTGATAACAT TGAGGTAATC
CGCAAATTGC TGGATACACT CAAAGCCTCG TTGATGGAAG AAAATCAGAT GGAGCTGGCG
TTACGCACCA GCGAAGCTTT ATTACAATTC AACCCTGAAG ATCCCTATGA AATTCGCGAT
CGCGGGTTGA TTTATGCGCA ACTGGATTGC GAACACGTTG CGTTGAACGA TTTAAGTTAT
TTCGTTGAAC AGTGTCCGGA AGACCCGATC AGCGAAATGA TCCGTGCGCA AATAAATAAC
ATCGCGCATA AACATATTGT GCTGCATTAA
 
Protein sequence
MRSLADFEFN KAPLCEGMIL ACEAIRRDFP SQDVYDELER LVSLAKEEIS QLLPLEEQLE 
KLIALFYGDW GFKASRGVYR LSDALWLDQV LKNRQGSAVS LGAVLLWVAN RLDLPLLPVI
FPTQLILRIE CPDGEIWLIN PFNGESLSEH MLDVWLKGNI SPSAELFYED LDEADNIEVI
RKLLDTLKAS LMEENQMELA LRTSEALLQF NPEDPYEIRD RGLIYAQLDC EHVALNDLSY
FVEQCPEDPI SEMIRAQINN IAHKHIVLH