| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2371 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2541171 |
|---|
| End bp | 2543846 |
|---|
| Gene Length | 2676 bp |
|---|
| Protein Length | 891 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | aconitate hydratase 1 |
|---|
| Protein accession | ACX40014 |
|---|
| Protein GI | 260449592 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00215516 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAA CCCTACGAGA AGCCAGTAAG GACACGTTGC AGGCCAAAGA TAAAACTTAC
CACTACTACA GCCTGCCGCT TGCTGCTAAA TCACTGGGCG ATATCACCCG TCTACCCAAG
TCACTCAAAG TTTTGCTCGA AAACCTGCTG CGCTGGCAGG ATGGTAACTC GGTTACCGAA
GAGGATATCC ACGCGCTGGC AGGATGGCTG AAAAATGCCC ATGCTGACCG TGAAATTGCC
TACCGCCCGG CAAGGGTGCT GATGCAGGAC TTTACCGGCG TACCTGCCGT TGTTGATCTG
GCGGCAATGC GCGAAGCGGT TAAACGCCTC GGCGGCGATA CTGCAAAGGT TAACCCGCTC
TCACCGGTCG ACCTGGTCAT TGACCACTCG GTGACCGTCG ATCGTTTTGG TGATGATGAG
GCATTTGAAG AAAACGTACG CCTGGAAATG GAGCGCAACC ACGAACGTTA TGTGTTCCTG
AAATGGGGAA AGCAAGCGTT CAGTCGGTTT AGCGTCGTGC CGCCAGGCAC AGGCATTTGC
CATCAGGTTA ACCTCGAATA TCTCGGCAAA GCAGTGTGGA GTGAATTGCA GGACGGTGAA
TGGATTGCTT ATCCGGATAC ACTCGTTGGT ACTGACTCGC ACACCACCAT GATCAACGGC
CTTGGCGTGC TGGGGTGGGG CGTTGGTGGG ATCGAAGCAG AAGCCGCAAT GTTAGGCCAG
CCGGTTTCCA TGCTTATCCC GGATGTAGTG GGCTTCAAAC TTACCGGAAA ATTACGTGAA
GGTATTACCG CCACAGACCT GGTTCTCACT GTTACCCAAA TGCTGCGCAA ACATGGCGTG
GTGGGGAAAT TCGTCGAATT TTATGGTGAT GGTCTGGATT CACTACCGTT GGCGGATCGC
GCCACCATTG CCAATATGTC GCCAGAATAT GGTGCCACCT GTGGCTTCTT CCCAATCGAT
GCTGTAACCC TCGATTACAT GCGTTTAAGC GGGCGCAGCG AAGATCAGGT CGAGTTGGTC
GAAAAATATG CCAAAGCGCA GGGCATGTGG CGTAACCCGG GCGATGAACC AATTTTTACC
AGTACGTTAG AACTGGATAT GAATGACGTT GAAGCGAGCC TGGCAGGGCC TAAACGCCCA
CAGGATCGCG TTGCACTGCC CGATGTACCA AAAGCATTTG CCGCCAGTAA CGAACTGGAA
GTGAATGCCA CGCATAAAGA TCGCCAGCCG GTCGATTATG TTATGAACGG ACATCAGTAT
CAGTTACCTG ATGGCGCTGT GGTCATTGCT GCGATAACCT CGTGCACCAA CACCTCTAAC
CCAAGTGTGC TGATGGCCGC AGGCTTGCTG GCGAAAAAAG CCGTAACTCT GGGCCTCAAG
CGGCAACCAT GGGTCAAAGC GTCGCTGGCA CCGGGTTCGA AAGTCGTTTC TGATTATCTG
GCAAAAGCGA AACTGACACC GTATCTCGAC GAACTGGGGT TTAACCTTGT GGGATACGGT
TGTACCACCT GTATTGGTAA CTCTGGGCCG CTGCCCGATC CTATCGAAAC GGCAATCAAA
AAAGGCGATT TAACCGTCGG TGCGGTGCTG TCCGGCAACC GTAACTTTGA AGGCCGTATC
CATCCGCTGG TTAAAACTAA CTGGCTGGCC TCGCCGCCGC TGGTGGTTGC CTATGCGCTG
GCGGGAAATA TGAATATCAA CCTGGCTTCT GAGCCTATCG GCCATGATCG CAAAGGCGAT
CCGGTTTATC TGAAAGATAT CTGGCCATCG GCACAAGAAA TTGCCCGTGC GGTAGAACAA
GTCTCCACAG AAATGTTCCG CAAAGAGTAC GCAGAAGTTT TTGAAGGCAC AGCAGAGTGG
AAGGGAATTA ACGTCACACG ATCCGATACC TACGGTTGGC AGGAGGACTC AACCTATATT
CGCTTATCGC CTTTCTTTGA TGAAATGCAG GCAACACCAG CACCAGTGGA AGATATTCAC
GGTGCGCGGA TCCTCGCAAT GCTGGGGGAT TCAGTCACCA CTGACCATAT CTCTCCGGCG
GGCAGTATTA AGCCCGACAG CCCAGCGGGT CGATATCTAC AAGGTCGGGG TGTTGAGCGA
AAAGACTTTA ACTCCTACGG TTCGCGGCGT GGTAACCATG AAGTGATGAT GCGCGGCACC
TTCGCCAATA TTCGCATCCG TAATGAAATG GTGCCTGGCG TTGAAGGGGG GATGACGCGG
CATTTACCTG ACAGCGACGT AGTCTCTATT TATGATGCTG CGATGCGCTA TAAGCAGGAG
CAAACGCCGC TGGCGGTGAT TGCCGGGAAA GAGTATGGAT CAGGCTCCAG TCGTGACTGG
GCGGCAAAAG GTCCGCGTCT GCTTGGTATT CGTGTGGTGA TTGCCGAATC GTTTGAACGA
ATTCACCGTT CGAATTTAAT TGGCATGGGC ATCCTGCCGC TGGAATTTCC GCAAGGCGTA
ACGCGTAAAA CGTTAGGGCT AACCGGGGAA GAGAAGATTG ATATTGGCGA TCTGCAAAAC
CTACAACCCG GCGCGACGGT TCCGGTGACG CTTACGCGCG CGGATGGTAG CCAGGAAGTC
GTACCCTGCC GTTGTCGTAT CGACACCGCG ACGGAGTTGA CCTACTACCA GAACGACGGC
ATTTTGCATT ATGTCATTCG TAATATGTTG AAGTAA
|
|---|
| Protein sequence | MSSTLREASK DTLQAKDKTY HYYSLPLAAK SLGDITRLPK SLKVLLENLL RWQDGNSVTE
EDIHALAGWL KNAHADREIA YRPARVLMQD FTGVPAVVDL AAMREAVKRL GGDTAKVNPL
SPVDLVIDHS VTVDRFGDDE AFEENVRLEM ERNHERYVFL KWGKQAFSRF SVVPPGTGIC
HQVNLEYLGK AVWSELQDGE WIAYPDTLVG TDSHTTMING LGVLGWGVGG IEAEAAMLGQ
PVSMLIPDVV GFKLTGKLRE GITATDLVLT VTQMLRKHGV VGKFVEFYGD GLDSLPLADR
ATIANMSPEY GATCGFFPID AVTLDYMRLS GRSEDQVELV EKYAKAQGMW RNPGDEPIFT
STLELDMNDV EASLAGPKRP QDRVALPDVP KAFAASNELE VNATHKDRQP VDYVMNGHQY
QLPDGAVVIA AITSCTNTSN PSVLMAAGLL AKKAVTLGLK RQPWVKASLA PGSKVVSDYL
AKAKLTPYLD ELGFNLVGYG CTTCIGNSGP LPDPIETAIK KGDLTVGAVL SGNRNFEGRI
HPLVKTNWLA SPPLVVAYAL AGNMNINLAS EPIGHDRKGD PVYLKDIWPS AQEIARAVEQ
VSTEMFRKEY AEVFEGTAEW KGINVTRSDT YGWQEDSTYI RLSPFFDEMQ ATPAPVEDIH
GARILAMLGD SVTTDHISPA GSIKPDSPAG RYLQGRGVER KDFNSYGSRR GNHEVMMRGT
FANIRIRNEM VPGVEGGMTR HLPDSDVVSI YDAAMRYKQE QTPLAVIAGK EYGSGSSRDW
AAKGPRLLGI RVVIAESFER IHRSNLIGMG ILPLEFPQGV TRKTLGLTGE EKIDIGDLQN
LQPGATVPVT LTRADGSQEV VPCRCRIDTA TELTYYQNDG ILHYVIRNML K
|
|---|
| |