Gene EcDH1_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1954 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2108292 
End bp2109404 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function UPF0118 
Protein accessionACX39611 
Protein GI260449189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.133227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAATG TTCGTCAGCC CAGGGATGTC GCACAAATTC TGCTTTCGGT GCTGTTTTTA 
GCCATCATGA TTGTGGCATG TCTGTGGATT GTTCAACCCT TTATTCTCGG CTTTGCATGG
GCCGGTACGG TGGTTATCGC CACCTGGCCG GTATTGTTAC GTTTGCAAAA GATCATGTTT
GGCCGCCGCT CTCTCGCCGT TCTGGTGATG ACGCTGTTAT TAGTGATGGT GTTTATCATC
CCTATTGCTT TGCTGGTTAA CAGTATCGTC GACGGCAGCG GCCCGCTAAT TAAAGCCATT
TCCAGCGGTG ACATGACGTT ACCCGATCTG GCGTGGCTTA ATACCATTCC GGTGATTGGC
GCGAAGCTGT ATGCAGGCTG GCACAACTTG CTGGATATGG GGGGGACGGC GATCATGGCG
AAAGTCCGCC CTTATATTGG CACCACCACC ACCTGGTTCG TTGGGCAGGC GGCGCATATC
GGGCGCTTTA TGGTGCATTG TGCGCTGATG CTTCTCTTCA GTGCCCTGCT GTACTGGCGC
GGTGAACAGG TGGCACAAGG CATTCGCCAT TTTGCAACCC GTCTGGCAGG CGTTCGCGGA
GATGCCGCCG TGCTGCTGGC GGCACAGGCT ATCCGCGCGG TGGCGCTGGG TGTGGTGGTG
ACGGCGTTAG TACAGGCAGT GCTTGGCGGT ATCGGCCTCG CCGTATCCGG CGTACCTTAT
GCAACGTTGC TAACGGTGTT AATGATCCTC TCCTGCCTTG TCCAGCTTGG CCCGTTGCCG
GTACTGATTC CGGCGATTAT CTGGCTCTAC TGGACTGGCG ATACCACCTG GGGAACGGTA
TTGTTAGTGT GGAGCGGTGT GGTTGGCACG CTGGATAACG TCATCCGCCC AATGTTAATT
CGCATGGGTG CCGATTTACC GCTGATCCTG ATTCTCTCTG GCGTTATTGG TGGTTTGATT
GCTTTCGGGA TGATCGGTCT GTTTATTGGT CCGGTTCTGT TAGCCGTTTC CTGGCGTCTG
TTTGCCGCGT GGGTGGAAGA AGTCCCGCCG CCGACGGACC AACCGGAAGA AATTCTCGAA
GAACTTGGCG AAATCGAGAA ACCGAATAAG TAA
 
Protein sequence
MVNVRQPRDV AQILLSVLFL AIMIVACLWI VQPFILGFAW AGTVVIATWP VLLRLQKIMF 
GRRSLAVLVM TLLLVMVFII PIALLVNSIV DGSGPLIKAI SSGDMTLPDL AWLNTIPVIG
AKLYAGWHNL LDMGGTAIMA KVRPYIGTTT TWFVGQAAHI GRFMVHCALM LLFSALLYWR
GEQVAQGIRH FATRLAGVRG DAAVLLAAQA IRAVALGVVV TALVQAVLGG IGLAVSGVPY
ATLLTVLMIL SCLVQLGPLP VLIPAIIWLY WTGDTTWGTV LLVWSGVVGT LDNVIRPMLI
RMGADLPLIL ILSGVIGGLI AFGMIGLFIG PVLLAVSWRL FAAWVEEVPP PTDQPEEILE
ELGEIEKPNK