Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1913 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2066153 |
End bp | 2067544 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | sodium:dicarboxylate symporter |
Protein accession | ACX39571 |
Protein GI | 260449149 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0453037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTTC CATTAATTGC GAACATCGTG GTGTTCGTTG TACTGCTGTT TGCGCTGGCT CAGACCCGCC ATAAACAGTG GAGTCTGGCG AAAAAAGTGC TGGTGGGTCT GGTGATGGGT GTGGTTTTTG GCCTTGCCCT GCATACCATT TATGGTTCTG ACAGCCAGGT ACTTAAAGAT TCTGTACAGT GGTTTAACAT CGTTGGTAAC GGCTATGTTC AACTGCTGCA AATGATCGTT ATGCCGTTAG TCTTCGCCTC TATTCTGAGC GCGGTTGCCC GTCTGCATAA CGCATCTCAG TTAGGCAAAA TCAGTTTTCT GACCATCGGT ACGCTTTTGT TTACCACGCT GATTGCGGCG CTGGTCGGTG TGCTGGTCAC CAACCTGTTT GGTTTGACGG CTGAAGGTCT GGTTCAGGGT GGTGCAGAAA CTGCACGTCT GAACGCCATT GAAAGTAACT ATGTTGGTAA AGTCTCTGAT CTGAGCGTTC CGCAGCTGGT CTTGTCCTTT ATCCCGAAAA ACCCGTTTGC CGATCTTACC GGAGCCAATC CGACGTCAAT TATCAGCGTG GTAATTTTTG CCGCATTCCT CGGCGTAGCT GCATTGAAAC TGCTGAAGGA TGATGCGCCG AAAGGTGAAC GCGTCTTAGC CGCTATCGAT ACCCTACAAA GCTGGGTGAT GAAACTGGTT CGCCTGGTCA TGCAGTTGAC CCCTTACGGC GTTCTGGCTC TAATGACCAA AGTGGTTGCA GGTTCTAACT TGCAAGACAT CATCAAACTG GGAAGTTTCG TTGTCGCGTC CTACCTCGGT CTGCTGATTA TGTTTGCAGT GCATGGCATT CTGCTGGGCA TTAATGGCGT GAGTCCGCTG AAGTACTTCC GTAAGGTATG GCCTGTGCTG ACGTTTGCCT TTACCAGCCG TTCCAGTGCT GCGTCTATCC CACTGAATGT GGAAGCACAA ACGCGTCGTC TGGGCGTTCC TGAATCCATC GCCAGTTTCG CCGCCTCTTT CGGTGCAACC ATTGGTCAGA ACGGCTGCGC CGGTTTGTAT CCGGCAATGC TGGCGGTGAT GGTTGCGCCT ACGGTTGGCA TTAACCCGCT GGACCCGATG TGGATTGCGA CGCTGGTCGG TATTGTTACC GTTAGTTCCG CAGGCGTTGC CGGTGTCGGT GGTGGTGCAA CTTTCGCCGC ACTGATTGTA CTGCCTGCGA TGGGCCTGCC AGTAACCCTG GTGGCGCTGT TAATCTCCGT TGAACCGCTT ATCGACATGG GCCGTACGGC GTTAAACGTT AGTGGCTCGA TGACAGCTGG CACGCTGACC AGCCAGTGGC TGAAGCAAAC CGATAAAGCC ATTCTGGATA GCGAAGACGA CGCCGAACTG GCACACCATT AA
|
Protein sequence | MNFPLIANIV VFVVLLFALA QTRHKQWSLA KKVLVGLVMG VVFGLALHTI YGSDSQVLKD SVQWFNIVGN GYVQLLQMIV MPLVFASILS AVARLHNASQ LGKISFLTIG TLLFTTLIAA LVGVLVTNLF GLTAEGLVQG GAETARLNAI ESNYVGKVSD LSVPQLVLSF IPKNPFADLT GANPTSIISV VIFAAFLGVA ALKLLKDDAP KGERVLAAID TLQSWVMKLV RLVMQLTPYG VLALMTKVVA GSNLQDIIKL GSFVVASYLG LLIMFAVHGI LLGINGVSPL KYFRKVWPVL TFAFTSRSSA ASIPLNVEAQ TRRLGVPESI ASFAASFGAT IGQNGCAGLY PAMLAVMVAP TVGINPLDPM WIATLVGIVT VSSAGVAGVG GGATFAALIV LPAMGLPVTL VALLISVEPL IDMGRTALNV SGSMTAGTLT SQWLKQTDKA ILDSEDDAEL AHH
|
| |