Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1907 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 2059034 |
End bp | 2059873 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | ACX39565 |
Protein GI | 260449143 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00680023 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCAG TGATTAACGC GCCGGAAATT GCCACTGCCC GAGAACAGCA GTTGTTTAAT GGCAAAAACT TCCATGTGTT TATCTATAAC AAAACTGAGA GTATCAGCGG ACTGCATCAG CACGACTATT ATGAATTTAC TCTGGTATTA ACCGGGCGTT ATTTCCAGGA GATTAACGGT AAGCGCGTGT TACTGGAACG GGGCGATTTT GTTTTTATTC CGTTAGGTTC GCACCATCAA AGTTTTTATG AGTTTGGTGC CACGCGCATA TTGAACGTTG GGATCAGTAA ACGCTTTTTT GAGCAGCATT ACCTGCCATT GTTGCCTTAT TGCTTTGTCG CTTCGCAGGT ATACCGGACC AATAACGCTT TTCTCACCTA TGTGGAAACA GTGATTTCTT CATTGAATTT CCGCGAAACA GGGCTGGAAG AGTTTGTTGA GATGGTTACT TTTTATGTCA TTAACCGTTT ACGTCATTAC CGCGAAGAAC AGGTGATTGA TGATGTACCG CAGTGGCTGA AAAGTACGGT AGAAAAGATG CATGATAAAG AGCAGTTTAG TGAATCGGCG CTGGAGAATA TGGTGGCGTT GTCAGCCAAA TCACAGGAAT ATTTGACGCG AGCGACTCAA CGATATTATG GCAAAACGCC AATGCAGATT ATTAATGAAA TCCGTATTAA TTTTGCCAAA AAACAACTGG AAATGACCAA CTATTCAGTG ACGGATATTG CGTTTGAGGC CGGTTATAGT AGCCCGAGTT TGTTTATTAA AACGTTTAAG AAATTAACGT CCTTTACGCC TAAGAGCTAT CGTAAGAAAT TGACTGAATT TAATCAGTAA
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Protein sequence | MQPVINAPEI ATAREQQLFN GKNFHVFIYN KTESISGLHQ HDYYEFTLVL TGRYFQEING KRVLLERGDF VFIPLGSHHQ SFYEFGATRI LNVGISKRFF EQHYLPLLPY CFVASQVYRT NNAFLTYVET VISSLNFRET GLEEFVEMVT FYVINRLRHY REEQVIDDVP QWLKSTVEKM HDKEQFSESA LENMVALSAK SQEYLTRATQ RYYGKTPMQI INEIRINFAK KQLEMTNYSV TDIAFEAGYS SPSLFIKTFK KLTSFTPKSY RKKLTEFNQ
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