| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1767 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1919147 |
|---|
| End bp | 1920247 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | NapC/NirT cytochrome c domain protein |
|---|
| Protein accession | ACX39426 |
|---|
| Protein GI | 260449004 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.936098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGGGA AAAAACGCAT TGGGTTATTG TTTTTGCTGA TAGCGGTTGT GGTTGGTGGC
GGCGGGTTAT TGCTGGCGCA AAAAGTCTTA CATAAAACGT CGGATACAGC ATTTTGCCTT
TCCTGCCACT CGATGAGTAA ACCTTTTGAG GAATATCAGG GAACTGTCCA CTTTTCGAAC
CAGAAAGGGA TACGTGCGGA ATGTGCCGAT TGCCATATTC CAAAGTCAGG GATGGATTAT
TTATTTGCTA AATTAAAGGC ATCTAAAGAT ATTTATCATG AATTTGTTAG CGGCAAAATA
GACAGTGACG ATAAGTTCGA AGCTCATCGC CAGGAAATGG CCGAAACAGT ATGGAAAGAA
TTAAAAGCCA CTGACTCTGC AACGTGCCGT AGTTGCCATT CTTTTGATGC CATGGATATT
GCCTCGCAAA GTGAATCTGC GCAGAAAATG CATAACAAAG CACAAAAGGA CAGCGAAACC
TGTATCGATT GTCATAAAGG CATTGCCCAT TTTCCGCCAG AAATAAAAAT GGATGACAAC
GCGGCGCATG AGCTGGAAAG TCAGGCCGCT ACTTCAGTTA CTAATGGCGC ACATATTTAT
CCTTTCAAAA CTTCTCACAT AGGCGAGCTG GCTACCGTGA ATCCTGGAAC CGATCTCACC
GTCGTTGATG CCAGTGGCAA ACAGCCGATC GTTCTGTTGC AGGGTTATCA AATGCAGGGC
AGTGAAAACA CGCTCTACCT GGCGGCAGGT CAACGGCTGG CGCTAGCCAC ATTAAGTGAA
GAAGGTATCA AGGCGCTCAC TGTAAACGGG GAATGGCAGG CTGACGAATA CGGCAATCAA
TGGCGTCAGG CGTCTTTACA GGGTGCGCTT ACCGATCCCG CATTAGCGGA CCGTAAACCG
CTATGGCAAT ACGCTGAAAA ACTTGACGAT ACCTATTGCG CTGGTTGTCA TGCCCCTATT
GCCGCCGACC ATTACACCGT CAATGCGTGG CCGTCCATTG CCAAAGGAAT GGGGGCACGA
ACCAGCATGA GCGAAAACGA ACTGGACATT TTAACGCGGT ATTTCCAGTA CAACGCCAAA
GATATTACCG AGAAACAGTG A
|
|---|
| Protein sequence | MRGKKRIGLL FLLIAVVVGG GGLLLAQKVL HKTSDTAFCL SCHSMSKPFE EYQGTVHFSN
QKGIRAECAD CHIPKSGMDY LFAKLKASKD IYHEFVSGKI DSDDKFEAHR QEMAETVWKE
LKATDSATCR SCHSFDAMDI ASQSESAQKM HNKAQKDSET CIDCHKGIAH FPPEIKMDDN
AAHELESQAA TSVTNGAHIY PFKTSHIGEL ATVNPGTDLT VVDASGKQPI VLLQGYQMQG
SENTLYLAAG QRLALATLSE EGIKALTVNG EWQADEYGNQ WRQASLQGAL TDPALADRKP
LWQYAEKLDD TYCAGCHAPI AADHYTVNAW PSIAKGMGAR TSMSENELDI LTRYFQYNAK
DITEKQ
|
|---|
| |