Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1590 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 1731473 |
End bp | 1734790 |
Gene Length | 3318 bp |
Protein Length | 1105 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | ACX39255 |
Protein GI | 260448833 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.131154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAC AATCACAGCA TGTATTAATT GCCCTGCCCC ACCCGCTGCT TCACCTGGTC AGTTTAGGTT TAGTCTCGTT TATCTTTACC CTTTTCTCGC TTGAGCTTTC GCAGTTTGGC ACCCAACTCG CCCCACTGTG GTTCCCGACG TCCATCATGA TGGTGGCGTT TTATCGCCAT GCCGGGCGCA TGTGGCCGGG AATTGCGCTG AGCTGTTCGC TGGGAAATAT CGCCGCATCC ATCCTGCTTT TTTCCACCAG CTCGCTGAAC ATGACCTGGA CGACCATCAA TATTGTTGAA GCCGTGGTCG GGGCAGTGCT GCTACGTAAA TTGCTGCCGT GGTATAACCC CTTGCAAAAT CTGGCTGACT GGCTGCGTCT GGCACTCGGC AGCGCCATTG TTCCGCCTCT GTTGGGGGGT GTTCTGGTTG TCCTGCTGAC GCCCGGAGAC GATCCTCTCA GGGCATTTTT GATATGGGTA CTGTCAGAAT CCATCGGCGC TCTGGCACTG GTGCCGCTGG GATTGTTATT TAAACCACAC TATCTGCTGC GCCATCGCAA CCCACGGTTG CTTTTTGAGT CGCTGCTCAC GTTAGCCATC ACACTGACGT TAAGCTGGCT TTCGATGCTG TATCTGCCGT GGCCTTTTAC TTTCATTATT GTGCTGTTGA TGTGGAGCGC CGTGCGTCTG CCACGAATGG AAGCCTTTTT GATCTTCCTT ACCACGGTGA TGATGGTGTC GCTGATGATG GCCGCGGATC CCTCCCTGCT TGCTACGCCG CGTACGTACC TGATGAGCCA TATGCCGTGG CTACCGTTTT TGCTGATCCT GCTGCCCGCC AACATCATGA CCATGGTGAT GTATGCCTTT CGTGCGGAAC GCAAACACAT TTCCGAAAGC GAAACCCACT TTCGGAACGC GATGGAATAT TCCGCTATCG GTATGGCGTT AGTGGGCACC GAGGGACAAT GGCTGCAAAC CAACAAAGCG CTCTGCCAGT TTCTCGGGTA CAGTCAGGAA GAGCTGCGCG GACTCACCTT TCAGCAACTG ACCTGGCCGG AGGATCTCAA TAAAGATCTC CAACAGGTTG AAAAGCTGAT AAGCGGTGAA ATAAACACCT ATTCAATGGA AAAACGCTAC TACAACCGCA ATGGCGATGT TGTCTGGGCG TTGCTTGCCG TCTCACTGGT GCGCCACACG GATGGCACGC CGCTCTATTT TATCGCTCAG ATTGAAGACA TTAACGAGCT AAAACGCACC GAACAGGTCA ATCAGCAACT GATGGAGCGC ATCACTCTGG CTAACGAAGC GGGCGGGATT GGCATCTGGG AGTGGGAGTT GAAGCCGAAT ATTTTTAGCT GGGATAAGCG GATGTTCGAG CTGTATGAAA TTCCTCCACA TATCAAACCG AACTGGCAGG TGTGGTACGA GTGCGTGCTG CCGGAAGATC GCCAGCATGC CGAAAAAGTG ATTCGTGATT CGTTGCAATC ACGCTCGCCC TTTAAACTGG AATTTCGCAT TACCGTAAAA GACGGTATTC GCCATATCCG CGCCCTCGCC AACCGGGTAC TGAATAAAGA AGGCGAAGTC GAACGTCTCC TCGGCATCAA TATGGATATG ACCGAAGTGA AACAGCTTAA CGAGGCATTG TTTCAGGAAA AAGAGCGCCT GCACATTACG CTTGATTCCA TCGGTGAAGC CGTGGTCTGT ATTGATATGG CGATGAAAAT TACCTTTATG AATCCAGTGG CGGAGAAGAT GAGCGGCTGG ACGCAGGAAG AAGCGTTAGG TGTTCCGCTC CTGACGGTGT TGCATATTAC TTTTGGCGAC AACGGACCAT TAATGGAGAA CATTTACAGT GCCGACACCT CACGTTCCGC GATCGAGCAA GATGTGGTGT TGCACTGTCG GAGCGGCGGC AGTTACGACG TGCATTACAG TATTACGCCG TTAAGTACTC TGGACGGCAG CAATATTGGT TCGGTTCTGG TGATTCAGGA CGTTACCGAA TCACGCAAAA TGCTGCGCCA GCTGAGCTAC AGCGCCTCCC ATGATGCACT GACGCATCTC GCCAACCGCG CCAGTTTTGA GAAACAACTG CGTATCCTGC TGCAAACGGT AAACAGTACA CATCAGCGAC ATGCCCTGGT GTTTATCGAT CTTGATCGCT TTAAAGCGGT GAATGACAGC GCCGGGCATG CGGCGGGTGA CGCTTTGCTG CGCGAACTGG CGTCGTTAAT GCTGAGTATG CTGCGTTCCA GCGACGTGCT GGCGCGACTC GGTGGGGATG AATTTGGTCT GCTGCTACCA GACTGTAATG TTGAAAGCGC GCGTTTTATC GCTACACGCA TTATCAGTGC CGTGAATGAC TATCACTTTA TATGGGAAGG CCGTGTGCAT CGGGTAGGTG CCAGTGCCGG GATTACCTTG ATTGATGACA ACAATCATCA GGCGGCAGAA GTGATGTCGC AGGCTGATAT CGCCTGTTAT GCCTCCAAAA ATGGTGGCCG GGGCCGGGTG ACGGTTTACG AACCGCAGCA AGCTGCCGCA CATAGCGAAC GGGCGGCGAT GTCGCTTGAT GAACAGTGGC GGATGATTAA AGAGAATCAG TTGATGATGC TCGCCCACGG TGTCGCTTCG CCACGGATCC CGGAAGCGCG TAATTTGTGG CTGATTTCAC TTAAGCTCTG GAGTTGCGAA GGCGAGATTA TTGATGAACA AACATTTCGT CGTAGCTTCA GCGATCCGGC GCTTAGCCAT GCTCTTGACC GCCGGGTATT CCACGAATTT TTCCAGCAGG CCGCAAAAGC GGTTGCCAGT AAAGGCATAA GCATCTCCCT CCCCCTTTCC GTTGCCGGTT TGAGTAGCGC CACGCTGGTG AATGATCTGC TTGAGCAGCT GGAAAATAGC CCTCTACCAC CACGGTTATT ACATCTGATT ATTCCGGCTG AAGCGATTTT AGATCACGCA GAAAGCGTGC AAAAACTGCG GCTGGCGGGA TGTCGGATAG TGCTCAGCCA GGTGGGCCGC GATCTGCAAA TCTTCAACTC GCTGAAAGCG AATATGGCAG ATTACCTGCT ACTTGATGGT GAGTTATGCG CCAACGTGCA GGGTAATTTG ATGGATGAGA TGCTGATTAC GATTATTCAG GGGCACGCTC AGCGACTCGG GATGAAAACC ATCGCCGGGC CAGTCGTTTT ACCCTTAGTG ATGGATACGC TTTCTGGCAT CGGCGTCGAT CTGATTTATG GTGAGGTGAT TGCCGATGCC CAACCGCTGG ATTTGCTGGT GAATAGTAGT TATTTCGCGA TTAACTGA
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Protein sequence | MSKQSQHVLI ALPHPLLHLV SLGLVSFIFT LFSLELSQFG TQLAPLWFPT SIMMVAFYRH AGRMWPGIAL SCSLGNIAAS ILLFSTSSLN MTWTTINIVE AVVGAVLLRK LLPWYNPLQN LADWLRLALG SAIVPPLLGG VLVVLLTPGD DPLRAFLIWV LSESIGALAL VPLGLLFKPH YLLRHRNPRL LFESLLTLAI TLTLSWLSML YLPWPFTFII VLLMWSAVRL PRMEAFLIFL TTVMMVSLMM AADPSLLATP RTYLMSHMPW LPFLLILLPA NIMTMVMYAF RAERKHISES ETHFRNAMEY SAIGMALVGT EGQWLQTNKA LCQFLGYSQE ELRGLTFQQL TWPEDLNKDL QQVEKLISGE INTYSMEKRY YNRNGDVVWA LLAVSLVRHT DGTPLYFIAQ IEDINELKRT EQVNQQLMER ITLANEAGGI GIWEWELKPN IFSWDKRMFE LYEIPPHIKP NWQVWYECVL PEDRQHAEKV IRDSLQSRSP FKLEFRITVK DGIRHIRALA NRVLNKEGEV ERLLGINMDM TEVKQLNEAL FQEKERLHIT LDSIGEAVVC IDMAMKITFM NPVAEKMSGW TQEEALGVPL LTVLHITFGD NGPLMENIYS ADTSRSAIEQ DVVLHCRSGG SYDVHYSITP LSTLDGSNIG SVLVIQDVTE SRKMLRQLSY SASHDALTHL ANRASFEKQL RILLQTVNST HQRHALVFID LDRFKAVNDS AGHAAGDALL RELASLMLSM LRSSDVLARL GGDEFGLLLP DCNVESARFI ATRIISAVND YHFIWEGRVH RVGASAGITL IDDNNHQAAE VMSQADIACY ASKNGGRGRV TVYEPQQAAA HSERAAMSLD EQWRMIKENQ LMMLAHGVAS PRIPEARNLW LISLKLWSCE GEIIDEQTFR RSFSDPALSH ALDRRVFHEF FQQAAKAVAS KGISISLPLS VAGLSSATLV NDLLEQLENS PLPPRLLHLI IPAEAILDHA ESVQKLRLAG CRIVLSQVGR DLQIFNSLKA NMADYLLLDG ELCANVQGNL MDEMLITIIQ GHAQRLGMKT IAGPVVLPLV MDTLSGIGVD LIYGEVIADA QPLDLLVNSS YFAIN
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