Gene EcDH1_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1563 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1701810 
End bp1702262 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content43% 
IMG OID 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionACX39231 
Protein GI260448809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00172388 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAACC TGTTTGTTCG TAGCGGAATT TCTTTTGTCG ATCGTAGCGA AGTTTTAACC 
CATATCGGTA ATGAGATGCT CGCCAAAGGT GTGGTTCATG ATACCTGGCC ACAGGCATTA
ATTGCCAGAG AAGCAGAATT CCCTACCGGG ATAATGCTTG AGCAGCACGC TATTGCAATA
CCGCATTGTG AGGCGATTCA TGCTAAGTCG TCAGCCATTT ATCTGTTAAG GCCAACAAAT
AAAGTTCATT TTCAGCAAGC GGATGATGAT AACGACGTGG CGGTATCGTT GGTTATTGCG
TTGATTGTGG AAAATCCGCA GCAGCAATTG AAACTTTTAC GCTGTTTATT TGGCAAGTTA
CAACAGCCCG ATATCGTCGA GACACTAATC ACTCTTCCTG AAACCCAGTT AAAGGAATAC
TTCACAAAGT ATGTTTTAGA TTCAGACGAA TAA
 
Protein sequence
MTNLFVRSGI SFVDRSEVLT HIGNEMLAKG VVHDTWPQAL IAREAEFPTG IMLEQHAIAI 
PHCEAIHAKS SAIYLLRPTN KVHFQQADDD NDVAVSLVIA LIVENPQQQL KLLRCLFGKL
QQPDIVETLI TLPETQLKEY FTKYVLDSDE